CRAN Package Check Results for Package netweavers

Last updated on 2014-08-27 10:47:54.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 3.08 32.09 35.17 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 2.58 30.25 32.83 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 76.12 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 71.20 NOTE
r-devel-osx-x86_64-clang 1.0 61.74 NOTE
r-devel-windows-ix86+x86_64 1.0 9.00 50.00 59.00 NOTE
r-patched-linux-x86_64 1.0 2.50 32.07 34.56 NOTE
r-patched-solaris-sparc 1.0 423.60 NOTE --no-vignettes
r-patched-solaris-x86 1.0 102.40 NOTE
r-release-linux-ix86 1.0 3.17 42.98 46.15 NOTE
r-release-linux-x86_64 1.0 2.58 32.69 35.28 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-osx-x86_64-snowleopard 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 9.00 51.00 60.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 9.00 338.00 347.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘Biobase’ ‘BiocGenerics’ ‘igraph’ ‘limma’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    DEtest: no visible global function definition for ‘varLabels’
    DEtest: no visible global function definition for ‘exprs’
    DEtest: no visible global function definition for ‘pData’
    DEtest: no visible global function definition for
     ‘duplicateCorrelation’
    DEtest: no visible global function definition for ‘lmFit’
    DEtest: no visible global function definition for ‘eBayes’
    DEtest: no visible global function definition for ‘contrasts.fit’
    DEtest: no visible global function definition for ‘decideTests’
    DEtest: no visible global function definition for ‘topTable’
    esetSummarizer: no visible global function definition for ‘fData’
    esetSummarizer: no visible global function definition for ‘exprs’
    esetSummarizer: no visible global function definition for ‘phenoData’
    findDenseClusters: no visible global function definition for ‘simplify’
    findDenseClusters: no visible global function definition for
     ‘graph.edgelist’
    findDenseClusters: no visible global function definition for
     ‘get.vertex.attribute’
    findDenseClusters: no visible global function definition for
     ‘walktrap.community’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.0
Check: for old-style vignette sources
Result: NOTE
    Vignette sources only in ‘inst/doc’:
     ‘netweavers.Rnw’
    A ‘vignettes’ directory is required as from R 3.1.0
    and these will not be indexed nor checked
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64

Version: 1.0
Flags: --no-vignettes
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘Biobase’ ‘BiocGenerics’ ‘igraph’ ‘limma’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-patched-solaris-sparc

Version: 1.0
Flags: --no-vignettes
Check: for old-style vignette sources
Result: NOTE
    Vignette sources only in ‘inst/doc’:
     ‘netweavers.Rnw’
    A ‘vignettes’ directory is required as from R 3.1.0
    and these will not be indexed nor checked
Flavor: r-patched-solaris-sparc

Version: 1.0
Check: for old-style vignette sources
Result: NOTE
    Vignette sources only in 'inst/doc':
     'netweavers.Rnw'
    A 'vignettes' directory will be required as from R 3.1.0
Flavor: r-oldrel-windows-ix86+x86_64