CRAN Package Check Results for Package oblique.tree

Last updated on 2015-07-27 23:48:06.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.1 15.29 46.35 61.64 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.1 14.75 45.32 60.07 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.1 119.19 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.1 111.99 NOTE
r-devel-osx-x86_64-clang 1.1.1 90.71 NOTE
r-devel-windows-ix86+x86_64 1.1.1 47.00 98.00 145.00 NOTE
r-patched-linux-x86_64 1.1.1 15.02 45.60 60.62 NOTE
r-patched-solaris-sparc 1.1.1 743.30 NOTE
r-patched-solaris-x86 1.1.1 162.20 ERROR
r-release-linux-x86_64 1.1.1 15.41 45.57 60.98 NOTE
r-release-osx-x86_64-mavericks 1.1.1 NOTE
r-release-windows-ix86+x86_64 1.1.1 60.00 150.00 210.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1.1 58.00 128.00 186.00 NOTE

Check Details

Version: 1.1.1
Check: dependencies in R code
Result: NOTE
    Unexported object imported by a ':::' call: ‘tree:::tree.matrix’
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.1
Check: R code for possible problems
Result: NOTE
    glmpath: no visible binding for global variable ‘binomial’
    glmpath: no visible global function definition for ‘gaussian’
    glmpath: no visible global function definition for ‘binomial’
    glmpath: no visible global function definition for ‘poisson’
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for ‘glm.fit’
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for ‘binomial’
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for ‘predict’
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for ‘glm’
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for ‘step’
    oblique.tree: no visible global function definition for ‘model.extract’
    plot.trim.sequence: no visible global function definition for ‘plot’
    plot.trim.sequence: no visible global function definition for ‘box’
    plot.trim.sequence: no visible global function definition for ‘axis’
    plot.trim.sequence: no visible global function definition for ‘par’
    predict.glmpath: no visible global function definition for ‘step’
    predict.glmpath: no visible global function definition for ‘approx’
    predict.oblique.tree: no visible global function definition for
     ‘model.frame’
    predict.oblique.tree: no visible global function definition for
     ‘as.formula’
    predict.oblique.tree: no visible global function definition for
     ‘model.extract’
    prune.oblique.tree: no visible global function definition for
     ‘model.frame’
    prune.oblique.tree: no visible global function definition for
     ‘as.formula’
    prune.oblique.tree: no visible global function definition for
     ‘model.response’
    trim.oblique.tree: no visible global function definition for
     ‘model.frame’
    trim.oblique.tree: no visible global function definition for
     ‘as.formula’
    trim.oblique.tree: no visible global function definition for
     ‘model.response’
    Undefined global functions or variables:
     approx as.formula axis binomial box gaussian glm glm.fit
     model.extract model.frame model.response par plot poisson predict
     step
    Consider adding
     importFrom("graphics", "axis", "box", "par", "plot")
     importFrom("stats", "approx", "as.formula", "binomial", "gaussian",
     "glm", "glm.fit", "model.extract", "model.frame",
     "model.response", "poisson", "predict", "step")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.1.1
Check: compiled code
Result: NOTE
    File ‘oblique.tree/libs/oblique.tree.so’:
     Found ‘_gfortran_st_write’, possibly from ‘write’ (Fortran), ‘print’
     (Fortran)
     Objects: ‘mi02lib.o’, ‘mi05funs.o’, ‘mi10unix.o’, ‘mi11sys.o’,
     ‘mi12solv.o’, ‘mi20amat.o’, ‘mi25bfac.o’, ‘mi26bfac.o’,
     ‘mi27lu.o’, ‘mi30spec.o’, ‘mi35mps.o’, ‘mi36mps.o’, ‘mi40bfil.o’,
     ‘mi50lp.o’, ‘mi60srch.o’, ‘mi65rmod.o’, ‘mi70nobj.o’,
     ‘mi80ncon.o’, ‘mi81ncon.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1.1
Check: compiled code
Result: NOTE
    File ‘oblique.tree/libs/oblique.tree.so’:
     Found ‘__gfortran_st_write’, possibly from ‘write’ (Fortran), ‘print’
     (Fortran)
     Objects: ‘mi02lib.o’, ‘mi05funs.o’, ‘mi10unix.o’, ‘mi11sys.o’,
     ‘mi12solv.o’, ‘mi20amat.o’, ‘mi25bfac.o’, ‘mi26bfac.o’,
     ‘mi27lu.o’, ‘mi30spec.o’, ‘mi35mps.o’, ‘mi36mps.o’, ‘mi40bfil.o’,
     ‘mi50lp.o’, ‘mi60srch.o’, ‘mi65rmod.o’, ‘mi70nobj.o’,
     ‘mi80ncon.o’, ‘mi81ncon.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-osx-x86_64-clang, r-release-osx-x86_64-mavericks

Version: 1.1.1
Check: compiled code
Result: NOTE
    File 'oblique.tree/libs/i386/oblique.tree.dll':
     Found '_gfortran_st_write', possibly from 'write' (Fortran), 'print'
     (Fortran)
     Objects: 'mi02lib.o', 'mi05funs.o', 'mi10unix.o', 'mi11sys.o',
     'mi12solv.o', 'mi20amat.o', 'mi25bfac.o', 'mi26bfac.o',
     'mi27lu.o', 'mi30spec.o', 'mi35mps.o', 'mi36mps.o', 'mi40bfil.o',
     'mi50lp.o', 'mi60srch.o', 'mi65rmod.o', 'mi70nobj.o',
     'mi80ncon.o', 'mi81ncon.o'
    File 'oblique.tree/libs/x64/oblique.tree.dll':
     Found '_gfortran_st_write', possibly from 'write' (Fortran), 'print'
     (Fortran)
     Objects: 'mi02lib.o', 'mi05funs.o', 'mi10unix.o', 'mi11sys.o',
     'mi12solv.o', 'mi20amat.o', 'mi25bfac.o', 'mi26bfac.o',
     'mi27lu.o', 'mi30spec.o', 'mi35mps.o', 'mi36mps.o', 'mi40bfil.o',
     'mi50lp.o', 'mi60srch.o', 'mi65rmod.o', 'mi70nobj.o',
     'mi80ncon.o', 'mi81ncon.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.1
Check: compiled code
Result: NOTE
    File ‘oblique.tree/libs/oblique.tree.so’:
     Found ‘__f90_esfw’, possibly from ‘print’ (Fortran), ‘write’
     (Fortran)
     Objects: ‘mi02lib.o’, ‘mi05funs.o’, ‘mi10unix.o’, ‘mi11sys.o’,
     ‘mi12solv.o’, ‘mi20amat.o’, ‘mi25bfac.o’, ‘mi26bfac.o’,
     ‘mi27lu.o’, ‘mi30spec.o’, ‘mi35mps.o’, ‘mi36mps.o’, ‘mi40bfil.o’,
     ‘mi50lp.o’, ‘mi60srch.o’, ‘mi65rmod.o’, ‘mi70nobj.o’,
     ‘mi80ncon.o’, ‘mi81ncon.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.1.1
Check: examples
Result: ERROR
    Running examples in ‘oblique.tree-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: plot.trim.sequence
    > ### Title: Plot a Trim Sequence
    > ### Aliases: plot.trim.sequence
    > ### Keywords: tree
    >
    > ### ** Examples
    >
    > #grow an oblique tree
    > data(Pima.tr, package="MASS")
    > ob.tree <- oblique.tree( type~.,
    + Pima.tr,
    + oblique.splits="only",
    + variable.selection="model.selection.aic")
    >
    > #look at the tree
    > plot(ob.tree);text(ob.tree)
    >
    > #and its trim sequence
    > plot(trim.oblique.tree(ob.tree))
    Error in list.of.node.names.to.prune[[list.index]] :
     subscript out of bounds
    Calls: plot ... trim.once -> oblique.tree.prune.nodes -> %in% -> match
    Execution halted
Flavor: r-patched-solaris-x86