CRAN Package Check Results for Package oblique.tree

Last updated on 2015-07-03 23:47:43.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.1 15.28 46.01 61.29 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.1 14.90 44.25 59.14 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.1 119.71 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.1 114.07 NOTE
r-devel-osx-x86_64-clang 1.1.1 105.36 NOTE
r-devel-windows-ix86+x86_64 1.1.1 63.00 103.00 166.00 NOTE
r-patched-linux-x86_64 1.1.1 13.96 45.80 59.75 NOTE
r-patched-solaris-sparc 1.1.1 744.70 NOTE
r-patched-solaris-x86 1.1.1 162.90 ERROR
r-release-linux-x86_64 1.1.1 15.03 45.40 60.43 NOTE
r-release-osx-x86_64-mavericks 1.1.1 NOTE
r-release-windows-ix86+x86_64 1.1.1 57.00 102.00 159.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1.1 49.00 118.00 167.00 NOTE

Check Details

Version: 1.1.1
Check: dependencies in R code
Result: NOTE
    Unexported object imported by a ':::' call: ‘tree:::tree.matrix’
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.1
Check: R code for possible problems
Result: NOTE
    glmpath: no visible binding for global variable ‘binomial’
    glmpath: Error while checking: invalid ‘envir’ argument
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for ‘glm.fit’
    oblique.tree: Error while checking: invalid ‘envir’ argument
    plot.trim.sequence: no visible global function definition for ‘plot’
    plot.trim.sequence: no visible global function definition for ‘box’
    plot.trim.sequence: no visible global function definition for ‘axis’
    plot.trim.sequence: no visible global function definition for ‘par’
    predict.glmpath: no visible global function definition for ‘step’
    predict.glmpath: no visible global function definition for ‘approx’
    predict.oblique.tree: no visible global function definition for
     ‘model.frame’
    predict.oblique.tree: no visible global function definition for
     ‘as.formula’
    predict.oblique.tree: no visible global function definition for
     ‘model.extract’
    prune.oblique.tree: no visible global function definition for
     ‘model.frame’
    prune.oblique.tree: no visible global function definition for
     ‘as.formula’
    prune.oblique.tree: no visible global function definition for
     ‘model.response’
    trim.oblique.tree: no visible global function definition for
     ‘model.frame’
    trim.oblique.tree: no visible global function definition for
     ‘as.formula’
    trim.oblique.tree: no visible global function definition for
     ‘model.response’
    Undefined global functions or variables:
     approx as.formula axis binomial box glm.fit model.extract model.frame
     model.response par plot step
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.1.1
Check: compiled code
Result: NOTE
    File ‘oblique.tree/libs/oblique.tree.so’:
     Found ‘_gfortran_st_write’, possibly from ‘write’ (Fortran), ‘print’
     (Fortran)
     Objects: ‘mi02lib.o’, ‘mi05funs.o’, ‘mi10unix.o’, ‘mi11sys.o’,
     ‘mi12solv.o’, ‘mi20amat.o’, ‘mi25bfac.o’, ‘mi26bfac.o’,
     ‘mi27lu.o’, ‘mi30spec.o’, ‘mi35mps.o’, ‘mi36mps.o’, ‘mi40bfil.o’,
     ‘mi50lp.o’, ‘mi60srch.o’, ‘mi65rmod.o’, ‘mi70nobj.o’,
     ‘mi80ncon.o’, ‘mi81ncon.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1.1
Check: compiled code
Result: NOTE
    File ‘oblique.tree/libs/oblique.tree.so’:
     Found ‘__gfortran_st_write’, possibly from ‘write’ (Fortran), ‘print’
     (Fortran)
     Objects: ‘mi02lib.o’, ‘mi05funs.o’, ‘mi10unix.o’, ‘mi11sys.o’,
     ‘mi12solv.o’, ‘mi20amat.o’, ‘mi25bfac.o’, ‘mi26bfac.o’,
     ‘mi27lu.o’, ‘mi30spec.o’, ‘mi35mps.o’, ‘mi36mps.o’, ‘mi40bfil.o’,
     ‘mi50lp.o’, ‘mi60srch.o’, ‘mi65rmod.o’, ‘mi70nobj.o’,
     ‘mi80ncon.o’, ‘mi81ncon.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-osx-x86_64-clang, r-release-osx-x86_64-mavericks

Version: 1.1.1
Check: R code for possible problems
Result: NOTE
    glmpath: no visible binding for global variable 'binomial'
    glmpath: no visible global function definition for 'gaussian'
    glmpath: no visible global function definition for 'binomial'
    glmpath: no visible global function definition for 'poisson'
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for 'glm.fit'
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for 'binomial'
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for 'predict'
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for 'glm'
    oblique.tree : node.split.continuous.oblique: no visible global
     function definition for 'step'
    oblique.tree: no visible global function definition for 'model.extract'
    plot.trim.sequence: no visible global function definition for 'plot'
    plot.trim.sequence: no visible global function definition for 'box'
    plot.trim.sequence: no visible global function definition for 'axis'
    plot.trim.sequence: no visible global function definition for 'par'
    predict.glmpath: no visible global function definition for 'step'
    predict.glmpath: no visible global function definition for 'approx'
    predict.oblique.tree: no visible global function definition for
     'model.frame'
    predict.oblique.tree: no visible global function definition for
     'as.formula'
    predict.oblique.tree: no visible global function definition for
     'model.extract'
    prune.oblique.tree: no visible global function definition for
     'model.frame'
    prune.oblique.tree: no visible global function definition for
     'as.formula'
    prune.oblique.tree: no visible global function definition for
     'model.response'
    trim.oblique.tree: no visible global function definition for
     'model.frame'
    trim.oblique.tree: no visible global function definition for
     'as.formula'
    trim.oblique.tree: no visible global function definition for
     'model.response'
    Undefined global functions or variables:
     approx as.formula axis binomial box gaussian glm glm.fit
     model.extract model.frame model.response par plot poisson predict
     step
Flavor: r-devel-windows-ix86+x86_64

Version: 1.1.1
Check: compiled code
Result: NOTE
    File 'oblique.tree/libs/i386/oblique.tree.dll':
     Found '_gfortran_st_write', possibly from 'write' (Fortran), 'print'
     (Fortran)
     Objects: 'mi02lib.o', 'mi05funs.o', 'mi10unix.o', 'mi11sys.o',
     'mi12solv.o', 'mi20amat.o', 'mi25bfac.o', 'mi26bfac.o',
     'mi27lu.o', 'mi30spec.o', 'mi35mps.o', 'mi36mps.o', 'mi40bfil.o',
     'mi50lp.o', 'mi60srch.o', 'mi65rmod.o', 'mi70nobj.o',
     'mi80ncon.o', 'mi81ncon.o'
    File 'oblique.tree/libs/x64/oblique.tree.dll':
     Found '_gfortran_st_write', possibly from 'write' (Fortran), 'print'
     (Fortran)
     Objects: 'mi02lib.o', 'mi05funs.o', 'mi10unix.o', 'mi11sys.o',
     'mi12solv.o', 'mi20amat.o', 'mi25bfac.o', 'mi26bfac.o',
     'mi27lu.o', 'mi30spec.o', 'mi35mps.o', 'mi36mps.o', 'mi40bfil.o',
     'mi50lp.o', 'mi60srch.o', 'mi65rmod.o', 'mi70nobj.o',
     'mi80ncon.o', 'mi81ncon.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.1
Check: compiled code
Result: NOTE
    File ‘oblique.tree/libs/oblique.tree.so’:
     Found ‘__f90_esfw’, possibly from ‘print’ (Fortran), ‘write’
     (Fortran)
     Objects: ‘mi02lib.o’, ‘mi05funs.o’, ‘mi10unix.o’, ‘mi11sys.o’,
     ‘mi12solv.o’, ‘mi20amat.o’, ‘mi25bfac.o’, ‘mi26bfac.o’,
     ‘mi27lu.o’, ‘mi30spec.o’, ‘mi35mps.o’, ‘mi36mps.o’, ‘mi40bfil.o’,
     ‘mi50lp.o’, ‘mi60srch.o’, ‘mi65rmod.o’, ‘mi70nobj.o’,
     ‘mi80ncon.o’, ‘mi81ncon.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.1.1
Check: examples
Result: ERROR
    Running examples in ‘oblique.tree-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: plot.trim.sequence
    > ### Title: Plot a Trim Sequence
    > ### Aliases: plot.trim.sequence
    > ### Keywords: tree
    >
    > ### ** Examples
    >
    > #grow an oblique tree
    > data(Pima.tr, package="MASS")
    > ob.tree <- oblique.tree( type~.,
    + Pima.tr,
    + oblique.splits="only",
    + variable.selection="model.selection.aic")
    >
    > #look at the tree
    > plot(ob.tree);text(ob.tree)
    >
    > #and its trim sequence
    > plot(trim.oblique.tree(ob.tree))
    Error in list.of.node.names.to.prune[[list.index]] :
     subscript out of bounds
    Calls: plot ... trim.once -> oblique.tree.prune.nodes -> %in% -> match
    Execution halted
Flavor: r-patched-solaris-x86