CRAN Package Check Results for Package oncomodel

Last updated on 2014-04-23 17:47:49.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 0.71 12.18 12.90 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 0.67 12.30 12.97 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 25.31 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 23.68 NOTE
r-devel-osx-x86_64-clang 1.0 25.89 NOTE
r-devel-osx-x86_64-gcc 1.0 OK
r-devel-windows-ix86+x86_64 1.0 2.00 19.00 21.00 OK
r-patched-linux-x86_64 1.0 0.66 12.39 13.06 NOTE
r-patched-solaris-sparc 1.0 159.50 NOTE
r-patched-solaris-x86 1.0 36.50 NOTE
r-release-linux-ix86 1.0 2.00 25.00 27.00 NOTE
r-release-linux-x86_64 1.0 0.68 12.08 12.76 NOTE
r-release-osx-x86_64-mavericks 1.0 WARN
r-release-osx-x86_64-snowleopard 1.0 OK
r-release-windows-ix86+x86_64 1.0 3.00 20.00 23.00 OK
r-oldrel-windows-ix86+x86_64 1.0 3.00 22.00 25.00 OK

Check Details

Version: 1.0
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘comp.freq’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'oncomodel-package.Rd':
     \examples lines wider than 100 characters:
     #plot.phylog(y.phyl, cnodes =1, clabel.n=0.6, f=0.75, sub="Oncogenetic tree of given aberrations")
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: PDF version of manual
Result: WARNING
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
    LaTeX errors found:
    ! LaTeX Error: File `upquote.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    35660690/Rd2.tex:8: ==> Fatal error occurred, no output PDF file produced!
Flavor: r-release-osx-x86_64-mavericks