CRAN Package Check Results for Package ordPens

Last updated on 2017-10-20 04:47:19.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3-1 3.13 48.77 51.90 NOTE
r-devel-linux-x86_64-debian-gcc 0.3-1 4.04 51.02 55.06 NOTE
r-devel-linux-x86_64-fedora-clang 0.3-1 112.26 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3-1 111.22 NOTE
r-devel-windows-ix86+x86_64 0.3-1 12.00 82.00 94.00 NOTE
r-patched-linux-x86_64 0.3-1 3.21 49.23 52.44 NOTE
r-patched-solaris-x86 0.3-1 160.30 NOTE
r-release-linux-x86_64 0.3-1 3.19 49.66 52.84 NOTE
r-release-windows-ix86+x86_64 0.3-1 15.00 112.00 127.00 NOTE
r-release-osx-x86_64 0.3-1 NOTE
r-oldrel-windows-ix86+x86_64 0.3-1 9.00 99.00 108.00 NOTE
r-oldrel-osx-x86_64 0.3-1 WARN

Check Details

Version: 0.3-1
Check: R code for possible problems
Result: NOTE
    genRidge: no visible global function definition for ‘plogis’
    ordGene: no visible global function definition for ‘anova’
    ordGene: no visible global function definition for ‘lm’
    ordSelect: no visible binding for global variable ‘sd’
    ordSmooth: no visible binding for global variable ‘sd’
    plot.ordPen: no visible global function definition for ‘grey’
    plot.ordPen: no visible global function definition for ‘devAskNewPage’
    plot.ordPen: no visible global function definition for ‘plot’
    plot.ordPen: no visible global function definition for ‘lines’
    predict.ordPen: no visible global function definition for ‘plogis’
    Undefined global functions or variables:
     anova devAskNewPage grey lines lm plogis plot sd
    Consider adding
     importFrom("grDevices", "devAskNewPage", "grey")
     importFrom("graphics", "lines", "plot")
     importFrom("stats", "anova", "lm", "plogis", "sd")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3-1
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘IsoGene’ ‘Biobase’
Flavor: r-release-osx-x86_64

Version: 0.3-1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘IsoGene’
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: S3 generic/method consistency
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: replacement functions
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: foreign function calls
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: R code for possible problems
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 keygenRidge: no visible global function definition for ‘plogis’
    ordGene: no visible global function definition for ‘anova’
    ordGene: no visible global function definition for ‘lm’
    ordSelect: no visible binding for global variable ‘sd’
    ordSmooth: no visible binding for global variable ‘sd’
    plot.ordPen: no visible global function definition for ‘grey’
    plot.ordPen: no visible global function definition for ‘devAskNewPage’
    plot.ordPen: no visible global function definition for ‘plot’
    plot.ordPen: no visible global function definition for ‘lines’
    predict.ordPen: no visible global function definition for ‘plogis’
    Undefined global functions or variables:
     anova devAskNewPage grey lines lm plogis plot sd
    Consider adding
     importFrom("grDevices", "devAskNewPage", "grey")
     importFrom("graphics", "lines", "plot")
     importFrom("stats", "anova", "lm", "plogis", "sd")
    to your NAMESPACE file.
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: for missing documentation entries
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: for code/documentation mismatches
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-oldrel-osx-x86_64

Version: 0.3-1
Check: Rd \usage sections
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64