CRAN Package Check Results for Package oro.nifti

Last updated on 2014-04-25 05:47:20.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.0 2.36 100.52 102.88 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.0 2.31 101.76 104.08 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.0 222.36 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.0 214.72 NOTE
r-devel-osx-x86_64-clang 0.4.0 170.76 NOTE
r-devel-osx-x86_64-gcc 0.4.0 WARN
r-devel-windows-ix86+x86_64 0.4.0 6.00 152.00 158.00 NOTE
r-patched-linux-x86_64 0.4.0 2.40 100.21 102.61 NOTE
r-patched-solaris-sparc 0.4.0 1137.30 NOTE
r-patched-solaris-x86 0.4.0 246.90 NOTE
r-release-linux-ix86 0.4.0 4.00 160.00 164.00 NOTE
r-release-linux-x86_64 0.4.0 2.43 100.92 103.35 NOTE
r-release-osx-x86_64-mavericks 0.4.0 WARN
r-release-osx-x86_64-snowleopard 0.4.0 NOTE
r-release-windows-ix86+x86_64 0.4.0 10.00 201.00 211.00 NOTE
r-oldrel-windows-ix86+x86_64 0.4.0 5.00 161.00 166.00 NOTE

Check Details

Version: 0.4.0
Check: installed package size
Result: NOTE
     installed size is 5.9Mb
     sub-directories of 1Mb or more:
     nifti 3.8Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.4.0
Check: dependencies in R code
Result: NOTE
    Unexported object imported by a ':::' call: ‘fmri:::connect.mask’
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.4.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘XML’
    
    Package which this enhances but not available for checking: ‘fmri’
Flavor: r-devel-osx-x86_64-gcc

Version: 0.4.0
Check: dependencies in R code
Result: NOTE
    Unavailable namespace imported from by a ':::' call: ‘fmri’
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-devel-osx-x86_64-gcc

Version: 0.4.0
Check: R code for possible problems
Result: NOTE
    .listToNodes : <anonymous>: no visible global function definition for
     ‘newXMLNode’
    newAuditTrail: no visible global function definition for ‘newXMLNode’
    niftiAuditTrailCreated: no visible global function definition for
     ‘xmlChildren’
    niftiAuditTrailCreated: no visible global function definition for
     ‘xmlName’
    niftiAuditTrailCreated: no visible global function definition for
     ‘xmlValue’
    niftiAuditTrailCreated: no visible global function definition for
     ‘newXMLNode’
    niftiAuditTrailCreated : <anonymous>: no visible global function
     definition for ‘xmlRoot’
    niftiAuditTrailCreated : <anonymous>: no visible global function
     definition for ‘xmlParse’
    niftiAuditTrailCreated : <anonymous>: no visible global function
     definition for ‘saveXML’
    niftiAuditTrailCreated: no visible global function definition for
     ‘addChildren’
    niftiAuditTrailEvent: no visible global function definition for
     ‘newXMLNode’
    niftiAuditTrailEvent: no visible global function definition for
     ‘addChildren’
    niftiAuditTrailSystemNode: no visible global function definition for
     ‘newXMLNode’
    niftiAuditTrailSystemNodeEvent: no visible global function definition
     for ‘addChildren’
    niftiAuditTrailSystemNodeEvent: no visible global function definition
     for ‘newXMLTextNode’
    niftiAuditTrailToExtension: no visible global function definition for
     ‘saveXML’
    niftiExtensionToAuditTrail: no visible global function definition for
     ‘xmlRoot’
    niftiExtensionToAuditTrail: no visible global function definition for
     ‘xmlParse’
Flavor: r-devel-osx-x86_64-gcc

Version: 0.4.0
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘fmri’
Flavor: r-devel-osx-x86_64-gcc

Version: 0.4.0
Check: running R code from vignettes
Result: WARNING
    Errors in running code in vignettes:
    when running code in ‘nifti.Rnw’
     ...
    
    > library("bitops")
    
    > library("XML")
    
     When sourcing ‘nifti.R’:
    Error: there is no package called ‘XML’
    Execution halted
Flavor: r-devel-osx-x86_64-gcc

Version: 0.4.0
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    
    Error: processing vignette 'nifti.Rnw' failed with diagnostics:
     chunk 1 (label = preliminaries)
    Error in library("XML") : there is no package called ‘XML’
    Execution halted
Flavor: r-devel-osx-x86_64-gcc

Version: 0.4.0
Check: PDF version of manual
Result: WARNING
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
    LaTeX errors found:
    ! LaTeX Error: File `upquote.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    3dcf3f5f/Rd2.tex:8: ==> Fatal error occurred, no output PDF file produced!
Flavor: r-release-osx-x86_64-mavericks