CRAN Package Check Results for Package pROC

Last updated on 2016-12-06 03:47:27.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.8 11.93 41.66 53.60 NOTE
r-devel-linux-x86_64-debian-gcc 1.8 11.33 40.62 51.95 NOTE
r-devel-linux-x86_64-fedora-clang 1.8 99.82 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 1.8 94.17 NOTE --no-stop-on-test-error
r-devel-macos-x86_64-clang 1.8 76.50 NOTE
r-devel-windows-ix86+x86_64 1.8 40.00 91.00 131.00 NOTE
r-patched-linux-x86_64 1.8 9.73 35.10 44.83 NOTE
r-patched-solaris-sparc 1.8 507.30 NOTE
r-patched-solaris-x86 1.8 95.60 NOTE
r-release-linux-x86_64 1.8 9.88 35.04 44.92 NOTE
r-release-osx-x86_64-mavericks 1.8 NOTE
r-release-windows-ix86+x86_64 1.8 58.00 78.00 136.00 NOTE
r-oldrel-windows-ix86+x86_64 1.8 57.00 87.00 144.00 OK

Check Details

Version: 1.8
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     ci.auc ci.coords ci.se ci.sp ci.thresholds roc.test
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.8
Check: R code for possible problems
Result: NOTE
    auc.roc: no visible global function definition for ‘coefficients’
    auc.roc: no visible global function definition for ‘pnorm’
    bootstrap.test: no visible global function definition for ‘sd’
    cdagger: no visible global function definition for ‘qnorm’
    ci.auc.bootstrap: no visible global function definition for ‘quantile’
    ci.auc.delong: no visible global function definition for ‘qnorm’
    ci.auc.smooth.roc: no visible global function definition for ‘quantile’
    ci.coords.roc: no visible binding for global variable ‘quantile’
    ci.coords.roc: no visible global function definition for ‘quantile’
    ci.coords.smooth.roc: no visible binding for global variable ‘quantile’
    ci.multiclass.auc.bootstrap: no visible global function definition for
     ‘quantile’
    ci.se.roc: no visible binding for global variable ‘quantile’
    ci.se.smooth.roc: no visible binding for global variable ‘quantile’
    ci.sp.roc: no visible binding for global variable ‘quantile’
    ci.sp.smooth.roc: no visible binding for global variable ‘quantile’
    ci.thresholds.roc: no visible binding for global variable ‘quantile’
    ci.thresholds.roc: no visible global function definition for ‘quantile’
    cov.roc.obuchowski: no visible global function definition for
     ‘coefficients’
    cov.roc.obuchowski: no visible global function definition for ‘cor’
    cov0.roc.obuchowski: no visible global function definition for
     ‘coefficients’
    cov0.roc.obuchowski: no visible global function definition for ‘cor’
    expr3: no visible global function definition for ‘pnorm’
    lines.roc.roc: no visible global function definition for ‘lines’
    multiclass.roc.formula: no visible global function definition for
     ‘model.extract’
    plot.ci.se: no visible global function definition for ‘par’
    plot.ci.se : <anonymous>: no visible global function definition for
     ‘segments’
    plot.ci.se: no visible global function definition for ‘polygon’
    plot.ci.se: no visible global function definition for ‘plot’
    plot.ci.sp: no visible global function definition for ‘par’
    plot.ci.sp : <anonymous>: no visible global function definition for
     ‘segments’
    plot.ci.sp: no visible global function definition for ‘polygon’
    plot.ci.sp: no visible global function definition for ‘plot’
    plot.ci.thresholds: no visible global function definition for ‘par’
    plot.ci.thresholds : <anonymous>: no visible global function definition
     for ‘segments’
    plot.roc.roc: no visible global function definition for ‘par’
    plot.roc.roc: no visible global function definition for ‘plot’
    plot.roc.roc: no visible global function definition for ‘box’
    plot.roc.roc: no visible global function definition for ‘axis’
    plot.roc.roc: no visible global function definition for
     ‘as.graphicsAnnot’
    plot.roc.roc: no visible global function definition for ‘abline’
    plot.roc.roc: no visible global function definition for ‘polygon’
    plot.roc.roc: no visible global function definition for ‘lines’
    plot.roc.roc: no visible global function definition for ‘points’
    plot.roc.roc: no visible global function definition for ‘text’
    power.roc.test.list: no visible global function definition for ‘qnorm’
    power.roc.test.list: no visible global function definition for ‘pnorm’
    power.roc.test.numeric: no visible global function definition for
     ‘qnorm’
    power.roc.test.numeric: no visible global function definition for
     ‘uniroot’
    power.roc.test.numeric: no visible global function definition for
     ‘pnorm’
    power.roc.test.roc: no visible global function definition for ‘qnorm’
    power.roc.test.roc: no visible global function definition for ‘pnorm’
    print.dataline: no visible global function definition for ‘terms’
    print.dataline: no visible global function definition for ‘as.formula’
    print.multiclass.roc: no visible global function definition for ‘terms’
    print.multiclass.roc: no visible global function definition for
     ‘as.formula’
    roc.default: no visible global function definition for ‘na.omit’
    roc.default: no visible global function definition for ‘median’
    roc.formula: no visible global function definition for ‘terms’
    roc.formula: no visible global function definition for ‘model.response’
    roc.test.formula: no visible global function definition for
     ‘model.extract’
    roc.test.roc: no visible global function definition for ‘pnorm’
    roc.test.roc: no visible global function definition for ‘pt’
    smooth.roc.binormal: no visible global function definition for ‘qnorm’
    smooth.roc.binormal: no visible global function definition for ‘lm’
    smooth.roc.binormal: no visible global function definition for
     ‘predict’
    smooth.roc.binormal: no visible global function definition for ‘pnorm’
    smooth.roc.density: no visible global function definition for ‘density’
    var.roc.obuchowski: no visible global function definition for
     ‘coefficients’
    var.theta.obuchowski: no visible global function definition for ‘qnorm’
    venkatraman.paired.permutation: no visible global function definition
     for ‘runif’
    venkatraman.unpaired.permutation: no visible global function definition
     for ‘runif’
    venkatraman.unpaired.stat: no visible global function definition for
     ‘approxfun’
    Undefined global functions or variables:
     abline approxfun as.formula as.graphicsAnnot axis box coefficients
     cor density lines lm median model.extract model.response na.omit par
     plot pnorm points polygon predict pt qnorm quantile runif sd segments
     terms text uniroot
    Consider adding
     importFrom("grDevices", "as.graphicsAnnot")
     importFrom("graphics", "abline", "axis", "box", "lines", "par", "plot",
     "points", "polygon", "segments", "text")
     importFrom("stats", "approxfun", "as.formula", "coefficients", "cor",
     "density", "lm", "median", "model.extract",
     "model.response", "na.omit", "pnorm", "predict", "pt",
     "qnorm", "quantile", "runif", "sd", "terms", "uniroot")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.8
Flags: --no-stop-on-test-error
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     ci.auc ci.coords ci.se ci.sp ci.thresholds roc.test
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.8
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    auc.roc: no visible global function definition for ‘coefficients’
    auc.roc: no visible global function definition for ‘pnorm’
    bootstrap.test: no visible global function definition for ‘sd’
    cdagger: no visible global function definition for ‘qnorm’
    ci.auc.bootstrap: no visible global function definition for ‘quantile’
    ci.auc.delong: no visible global function definition for ‘qnorm’
    ci.auc.smooth.roc: no visible global function definition for ‘quantile’
    ci.coords.roc: no visible binding for global variable ‘quantile’
    ci.coords.roc: no visible global function definition for ‘quantile’
    ci.coords.smooth.roc: no visible binding for global variable ‘quantile’
    ci.multiclass.auc.bootstrap: no visible global function definition for
     ‘quantile’
    ci.se.roc: no visible binding for global variable ‘quantile’
    ci.se.smooth.roc: no visible binding for global variable ‘quantile’
    ci.sp.roc: no visible binding for global variable ‘quantile’
    ci.sp.smooth.roc: no visible binding for global variable ‘quantile’
    ci.thresholds.roc: no visible binding for global variable ‘quantile’
    ci.thresholds.roc: no visible global function definition for ‘quantile’
    cov.roc.obuchowski: no visible global function definition for
     ‘coefficients’
    cov.roc.obuchowski: no visible global function definition for ‘cor’
    cov0.roc.obuchowski: no visible global function definition for
     ‘coefficients’
    cov0.roc.obuchowski: no visible global function definition for ‘cor’
    expr3: no visible global function definition for ‘pnorm’
    lines.roc.roc: no visible global function definition for ‘lines’
    multiclass.roc.formula: no visible global function definition for
     ‘model.extract’
    plot.ci.se: no visible global function definition for ‘par’
    plot.ci.se : <anonymous>: no visible global function definition for
     ‘segments’
    plot.ci.se: no visible global function definition for ‘polygon’
    plot.ci.se: no visible global function definition for ‘plot’
    plot.ci.sp: no visible global function definition for ‘par’
    plot.ci.sp : <anonymous>: no visible global function definition for
     ‘segments’
    plot.ci.sp: no visible global function definition for ‘polygon’
    plot.ci.sp: no visible global function definition for ‘plot’
    plot.ci.thresholds: no visible global function definition for ‘par’
    plot.ci.thresholds : <anonymous>: no visible global function definition
     for ‘segments’
    plot.roc.roc: no visible global function definition for ‘par’
    plot.roc.roc: no visible global function definition for ‘plot’
    plot.roc.roc: no visible global function definition for ‘box’
    plot.roc.roc: no visible global function definition for ‘axis’
    plot.roc.roc: no visible global function definition for
     ‘as.graphicsAnnot’
    plot.roc.roc: no visible global function definition for ‘abline’
    plot.roc.roc: no visible global function definition for ‘polygon’
    plot.roc.roc: no visible global function definition for ‘lines’
    plot.roc.roc: no visible global function definition for ‘points’
    plot.roc.roc: no visible global function definition for ‘text’
    power.roc.test.list: no visible global function definition for ‘qnorm’
    power.roc.test.list: no visible global function definition for ‘pnorm’
    power.roc.test.numeric: no visible global function definition for
     ‘qnorm’
    power.roc.test.numeric: no visible global function definition for
     ‘uniroot’
    power.roc.test.numeric: no visible global function definition for
     ‘pnorm’
    power.roc.test.roc: no visible global function definition for ‘qnorm’
    power.roc.test.roc: no visible global function definition for ‘pnorm’
    print.dataline: no visible global function definition for ‘terms’
    print.dataline: no visible global function definition for ‘as.formula’
    print.multiclass.roc: no visible global function definition for ‘terms’
    print.multiclass.roc: no visible global function definition for
     ‘as.formula’
    roc.default: no visible global function definition for ‘na.omit’
    roc.default: no visible global function definition for ‘median’
    roc.formula: no visible global function definition for ‘terms’
    roc.formula: no visible global function definition for ‘model.response’
    roc.test.formula: no visible global function definition for
     ‘model.extract’
    roc.test.roc: no visible global function definition for ‘pnorm’
    roc.test.roc: no visible global function definition for ‘pt’
    smooth.roc.binormal: no visible global function definition for ‘qnorm’
    smooth.roc.binormal: no visible global function definition for ‘lm’
    smooth.roc.binormal: no visible global function definition for
     ‘predict’
    smooth.roc.binormal: no visible global function definition for ‘pnorm’
    smooth.roc.density: no visible global function definition for ‘density’
    var.roc.obuchowski: no visible global function definition for
     ‘coefficients’
    var.theta.obuchowski: no visible global function definition for ‘qnorm’
    venkatraman.paired.permutation: no visible global function definition
     for ‘runif’
    venkatraman.unpaired.permutation: no visible global function definition
     for ‘runif’
    venkatraman.unpaired.stat: no visible global function definition for
     ‘approxfun’
    Undefined global functions or variables:
     abline approxfun as.formula as.graphicsAnnot axis box coefficients
     cor density lines lm median model.extract model.response na.omit par
     plot pnorm points polygon predict pt qnorm quantile runif sd segments
     terms text uniroot
    Consider adding
     importFrom("grDevices", "as.graphicsAnnot")
     importFrom("graphics", "abline", "axis", "box", "lines", "par", "plot",
     "points", "polygon", "segments", "text")
     importFrom("stats", "approxfun", "as.formula", "coefficients", "cor",
     "density", "lm", "median", "model.extract",
     "model.response", "na.omit", "pnorm", "predict", "pt",
     "qnorm", "quantile", "runif", "sd", "terms", "uniroot")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.8
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘microbenchmark’
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.8
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks