CRAN Package Check Results for Package paleoMAS

Last updated on 2017-02-25 23:47:55.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.0-1 2.76 68.82 71.59 NOTE
r-devel-linux-x86_64-debian-gcc 2.0-1 2.98 67.91 70.89 NOTE
r-devel-linux-x86_64-fedora-clang 2.0-1 159.61 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 2.0-1 145.15 NOTE --no-stop-on-test-error
r-devel-macos-x86_64-clang 2.0-1 114.14 NOTE --no-stop-on-test-error
r-devel-windows-ix86+x86_64 2.0-1 10.00 150.00 160.00 NOTE
r-patched-linux-x86_64 2.0-1 2.76 63.59 66.35 NOTE
r-patched-solaris-sparc 2.0-1 790.20 NOTE
r-patched-solaris-x86 2.0-1 162.60 NOTE
r-release-linux-x86_64 2.0-1 2.64 62.23 64.87 NOTE
r-release-osx-x86_64-mavericks 2.0-1 NOTE
r-release-windows-ix86+x86_64 2.0-1 10.00 140.00 150.00 NOTE
r-oldrel-windows-ix86+x86_64 2.0-1 14.00 106.00 120.00 NOTE

Check Details

Version: 2.0-1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.0-1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘MASS’ ‘lattice’ ‘vegan’
     Please remove these calls from your code.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.0-1
Check: R code for possible problems
Result: NOTE
    akaike.l: no visible global function definition for ‘loess’
    akaike.l: no visible global function definition for ‘layout’
    analog.mult: no visible global function definition for ‘approx’
    analog.sing: no visible global function definition for ‘plot’
    bcrossv.l1: no visible global function definition for ‘loess’
    bcrossv.l1: no visible global function definition for ‘predict’
    bcrossv.sa: no visible global function definition for ‘lm’
    bcrossv.sa: no visible global function definition for ‘anova’
    bcrossv.sa: no visible global function definition for ‘layout’
    bcrossv.sa: no visible global function definition for ‘plot’
    bcrossv.sa: no visible global function definition for ‘abline’
    change: no visible global function definition for ‘plot’
    chron: no visible global function definition for ‘approx’
    chron: no visible global function definition for ‘plot’
    chron: no visible global function definition for ‘points’
    chron: no visible global function definition for ‘arrows’
    chron: no visible global function definition for ‘lines’
    chron: no visible global function definition for ‘spline’
    dispersion: no visible global function definition for ‘loess’
    dispersion: no visible global function definition for ‘predict’
    dispersion.all: no visible binding for global variable ‘quantile’
    dispersion.all: no visible global function definition for ‘loess’
    dispersion.all: no visible global function definition for ‘predict’
    dispersion.all: no visible global function definition for ‘pdf’
    dispersion.all: no visible global function definition for ‘layout’
    dispersion.all: no visible global function definition for ‘plot’
    dispersion.all: no visible global function definition for ‘polygon’
    dispersion.all: no visible global function definition for ‘lines’
    dispersion.all: no visible global function definition for ‘points’
    dispersion.all: no visible global function definition for ‘qqnorm’
    dispersion.all: no visible global function definition for ‘qqline’
    dispersion.all: no visible global function definition for ‘abline’
    dispersion.all: no visible global function definition for ‘dev.off’
    fossil.values: no visible global function definition for ‘quantile’
    syas: no visible global function definition for ‘quantile’
    syas: no visible global function definition for ‘colorRampPalette’
    syas: no visible global function definition for ‘image’
    syas: no visible global function definition for ‘lines’
    synthetic: no visible global function definition for ‘loess’
    synthetic: no visible global function definition for ‘predict’
    synthetic: no visible global function definition for ‘layout’
    synthetic: no visible global function definition for ‘par’
    synthetic: no visible global function definition for ‘text’
    synthetic: no visible global function definition for ‘abline’
    synthetic: no visible global function definition for ‘polygon’
    vcrossv.all: no visible binding for global variable ‘quantile’
    vcrossv.all: no visible global function definition for ‘arrows’
    vcrossv.all: no visible global function definition for ‘lines’
    vcrossv.da: no visible global function definition for ‘predict’
    Undefined global functions or variables:
     abline anova approx arrows colorRampPalette dev.off image layout
     lines lm loess par pdf plot points polygon predict qqline qqnorm
     quantile spline text
    Consider adding
     importFrom("grDevices", "colorRampPalette", "dev.off", "pdf")
     importFrom("graphics", "abline", "arrows", "image", "layout", "lines",
     "par", "plot", "points", "polygon", "text")
     importFrom("stats", "anova", "approx", "lm", "loess", "predict",
     "qqline", "qqnorm", "quantile", "spline")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 2.0-1
Check: Rd line widths
Result: NOTE
    Rd file 'syas.Rd':
     \examples lines wider than 100 characters:
     bcrossv.sa(modernq[,1],perq2,a.d,delta=25,method="canberra",quant=0.05,trials=c(5, 0.05),detrend=FALSE)
    
    Rd file 'vcrossv.all.Rd':
     \examples lines wider than 100 characters:
     #build a dummy factor assuming that the first 10 species belong to group1 and the send ten belong to group 2
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 2.0-1
Flags: --no-stop-on-test-error
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 2.0-1
Flags: --no-stop-on-test-error
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘MASS’ ‘lattice’ ‘vegan’
     Please remove these calls from your code.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 2.0-1
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    akaike.l: no visible global function definition for ‘loess’
    akaike.l: no visible global function definition for ‘layout’
    analog.mult: no visible global function definition for ‘approx’
    analog.sing: no visible global function definition for ‘plot’
    bcrossv.l1: no visible global function definition for ‘loess’
    bcrossv.l1: no visible global function definition for ‘predict’
    bcrossv.sa: no visible global function definition for ‘lm’
    bcrossv.sa: no visible global function definition for ‘anova’
    bcrossv.sa: no visible global function definition for ‘layout’
    bcrossv.sa: no visible global function definition for ‘plot’
    bcrossv.sa: no visible global function definition for ‘abline’
    change: no visible global function definition for ‘plot’
    chron: no visible global function definition for ‘approx’
    chron: no visible global function definition for ‘plot’
    chron: no visible global function definition for ‘points’
    chron: no visible global function definition for ‘arrows’
    chron: no visible global function definition for ‘lines’
    chron: no visible global function definition for ‘spline’
    dispersion: no visible global function definition for ‘loess’
    dispersion: no visible global function definition for ‘predict’
    dispersion.all: no visible binding for global variable ‘quantile’
    dispersion.all: no visible global function definition for ‘loess’
    dispersion.all: no visible global function definition for ‘predict’
    dispersion.all: no visible global function definition for ‘pdf’
    dispersion.all: no visible global function definition for ‘layout’
    dispersion.all: no visible global function definition for ‘plot’
    dispersion.all: no visible global function definition for ‘polygon’
    dispersion.all: no visible global function definition for ‘lines’
    dispersion.all: no visible global function definition for ‘points’
    dispersion.all: no visible global function definition for ‘qqnorm’
    dispersion.all: no visible global function definition for ‘qqline’
    dispersion.all: no visible global function definition for ‘abline’
    dispersion.all: no visible global function definition for ‘dev.off’
    fossil.values: no visible global function definition for ‘quantile’
    syas: no visible global function definition for ‘quantile’
    syas: no visible global function definition for ‘colorRampPalette’
    syas: no visible global function definition for ‘image’
    syas: no visible global function definition for ‘lines’
    synthetic: no visible global function definition for ‘loess’
    synthetic: no visible global function definition for ‘predict’
    synthetic: no visible global function definition for ‘layout’
    synthetic: no visible global function definition for ‘par’
    synthetic: no visible global function definition for ‘text’
    synthetic: no visible global function definition for ‘abline’
    synthetic: no visible global function definition for ‘polygon’
    vcrossv.all: no visible binding for global variable ‘quantile’
    vcrossv.all: no visible global function definition for ‘arrows’
    vcrossv.all: no visible global function definition for ‘lines’
    vcrossv.da: no visible global function definition for ‘predict’
    Undefined global functions or variables:
     abline anova approx arrows colorRampPalette dev.off image layout
     lines lm loess par pdf plot points polygon predict qqline qqnorm
     quantile spline text
    Consider adding
     importFrom("grDevices", "colorRampPalette", "dev.off", "pdf")
     importFrom("graphics", "abline", "arrows", "image", "layout", "lines",
     "par", "plot", "points", "polygon", "text")
     importFrom("stats", "anova", "approx", "lm", "loess", "predict",
     "qqline", "qqnorm", "quantile", "spline")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 2.0-1
Flags: --no-stop-on-test-error
Check: Rd line widths
Result: NOTE
    Rd file 'syas.Rd':
     \examples lines wider than 100 characters:
     bcrossv.sa(modernq[,1],perq2,a.d,delta=25,method="canberra",quant=0.05,trials=c(5, 0.05),detrend=FALSE)
    
    Rd file 'vcrossv.all.Rd':
     \examples lines wider than 100 characters:
     #build a dummy factor assuming that the first 10 species belong to group1 and the send ten belong to group 2
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 2.0-1
Flags: --no-stop-on-test-error
Check: data for non-ASCII characters
Result: NOTE
     Note: found 1 marked UTF-8 string
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 2.0-1
Check: data for non-ASCII characters
Result: NOTE
     Note: found 1 marked UTF-8 string
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-mavericks, r-oldrel-windows-ix86+x86_64