CRAN Package Check Results for Package pamr

Last updated on 2014-04-20 01:48:01.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.54.1 1.44 25.23 26.67 NOTE
r-devel-linux-x86_64-debian-gcc 1.54.1 1.44 25.19 26.64 NOTE
r-devel-linux-x86_64-fedora-clang 1.54.1 50.97 NOTE
r-devel-linux-x86_64-fedora-gcc 1.54.1 48.04 NOTE
r-devel-macosx-x86_64-clang 1.54.1 46.41 NOTE
r-devel-macosx-x86_64-gcc 1.54.1 NOTE
r-devel-windows-ix86+x86_64 1.54.1 7.00 45.00 52.00 NOTE
r-patched-linux-x86_64 1.54.1 1.37 25.38 26.75 NOTE
r-patched-solaris-sparc 1.54.1 292.10 NOTE
r-patched-solaris-x86 1.54.1 67.30 NOTE
r-release-linux-ix86 NOTE
r-release-linux-x86_64 1.54.1 1.47 25.28 26.75 NOTE
r-release-windows-ix86+x86_64 1.54.1 8.00 48.00 56.00 NOTE
r-oldrel-windows-ix86+x86_64 1.54.1 7.00 53.00 60.00 NOTE

Check Details

Version: 1.54.1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘cluster’ ‘survival’
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘cluster’ ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macosx-x86_64-clang, r-devel-macosx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.54.1
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following functions:
     ‘pamr.plotfdr’ ‘pamr.xl.plotcen.compute’ ‘pamr.xl.plotsurvival’
     ‘pamr.xl.plotsurvival.strata’ ‘pamr.xl.plotsurvival.test’
    Found the platform-specific device:
     ‘win.metafile’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macosx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64

Version: 1.54.1
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘doc’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc