CRAN Package Check Results for Package pegas

Last updated on 2015-06-30 09:47:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8-1 2.62 37.06 39.68 NOTE
r-devel-linux-x86_64-debian-gcc 0.8-1 2.54 37.22 39.76 NOTE
r-devel-linux-x86_64-fedora-clang 0.8-1 80.55 OK
r-devel-linux-x86_64-fedora-gcc 0.8-1 75.84 OK
r-devel-osx-x86_64-clang 0.8-1 80.09 OK
r-devel-windows-ix86+x86_64 0.8-1 11.00 80.00 91.00 NOTE
r-patched-linux-x86_64 0.8-1 2.51 37.73 40.24 OK
r-patched-solaris-sparc 0.8-1 450.10 OK
r-patched-solaris-x86 0.8-1 116.40 OK
r-release-linux-x86_64 0.8-1 2.53 38.70 41.22 OK
r-release-osx-x86_64-mavericks 0.8-1 OK
r-release-windows-ix86+x86_64 0.8-1 19.00 76.00 95.00 OK
r-oldrel-windows-ix86+x86_64 0.8-1 20.00 123.00 143.00 OK

Check Details

Version: 0.8-1
Check: R code for possible problems
Result: NOTE
    .TempletonProb: no visible global function definition for ‘integrate’
    .drawAlternativeLinks: no visible global function definition for
     ‘segments’
    .drawSymbolsHaploNet: no visible global function definition for
     ‘symbols’
    .drawSymbolsHaploNet: no visible global function definition for
     ‘rainbow’
    .labelSegmentsHaploNet: no visible global function definition for
     ‘symbols’
    LD: no visible global function definition for ‘pchisq’
    LD2: no visible global function definition for ‘pchisq’
    MMD: no visible global function definition for ‘hist’
    MMD: no visible global function definition for ‘lines’
    MMD: no visible global function definition for ‘density’
    MMD: no visible global function definition for ‘par’
    R2.test: no visible global function definition for ‘rpois’
    R2.test: no visible global function definition for ‘cophenetic’
    R2.test: no visible global function definition for ‘hist’
    R2.test: no visible global function definition for ‘abline’
    R2.test: no visible global function definition for ‘mtext’
    R2.test: no visible global function definition for ‘na.omit’
    haplotype.DNAbin: no visible global function definition for ‘as.roman’
    hw.test.loci : test.polyploid: no visible global function definition
     for ‘pchisq’
    mst: no visible global function definition for ‘as.dist’
    plot.haploNet: no visible global function definition for ‘par’
    plot.haploNet : energy: no visible global function definition for
     ‘dist’
    plot.haploNet: no visible global function definition for ‘segments’
    plot.haploNet: no visible global function definition for ‘text’
    plot.haploNet: no visible global function definition for ‘locator’
    plot.haploNet: no visible global function definition for ‘strheight’
    plot.haploNet: no visible global function definition for ‘symbols’
    plot.haploNet: no visible global function definition for ‘rainbow’
    plot.haplotype: no visible global function definition for ‘barplot’
    plot.haplotype.loci: no visible global function definition for
     ‘barplot’
    plot.spectrum: no visible global function definition for ‘barplot’
    plot.summary.loci: no visible global function definition for ‘par’
    plot.summary.loci: no visible global function definition for ‘barplot’
    print.amova: no visible global function definition for ‘printCoefmat’
    read.loci: no visible global function definition for ‘read.table’
    replot : getMove: no visible global function definition for ‘locator’
    replot: no visible global function definition for ‘segments’
    replot: no visible global function definition for ‘text’
    rr.test: no visible global function definition for ‘pchisq’
    tajima.test: no visible global function definition for ‘pbeta’
    tajima.test: no visible global function definition for ‘pnorm’
    theta.h: no visible global function definition for ‘uniroot’
    theta.k: no visible global function definition for ‘uniroot’
    theta.msat : getThetas: no visible global function definition for
     ‘weighted.mean’
    theta.tree: no visible global function definition for ‘nlminb’
    write.loci: no visible global function definition for ‘write.table’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64