CRAN Package Check Results for Package penalized

Last updated on 2015-01-26 10:47:14.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9-45 1.05 74.33 75.38 OK
r-devel-linux-x86_64-debian-gcc 0.9-45 1.01 77.46 78.48 OK
r-devel-linux-x86_64-fedora-clang 0.9-45 149.56 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9-45 132.67 NOTE
r-devel-osx-x86_64-clang 0.9-45 127.45 NOTE
r-devel-windows-ix86+x86_64 0.9-45 4.00 97.00 101.00 OK
r-patched-linux-x86_64 0.9-45 1.21 74.20 75.40 OK
r-patched-solaris-sparc 0.9-45 861.20 OK
r-patched-solaris-x86 0.9-45 192.30 OK
r-release-linux-ix86 0.9-45 1.44 85.34 86.78 OK
r-release-linux-x86_64 0.9-45 1.11 76.78 77.90 OK
r-release-osx-x86_64-mavericks 0.9-45 WARN
r-release-osx-x86_64-snowleopard 0.9-45 OK
r-release-windows-ix86+x86_64 0.9-45 4.00 100.00 104.00 OK
r-oldrel-windows-ix86+x86_64 0.9-45 5.00 104.00 109.00 OK

Check Details

Version: 0.9-45
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     fitted.values
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 0.9-45
Check: running R code from vignettes
Result: WARN
    Errors in running code in vignettes:
    when running code in ‘penalized.Rnw’
     ...
    + fusedl = chr)
    
    
    > library(globaltest)
    Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
     there is no package called ‘annotate’
    
     When sourcing ‘penalized.R’:
    Error: package or namespace load failed for ‘globaltest’
    Execution halted
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-45
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: survival
    Loading required package: splines
    Welcome to penalized. For extended examples, see vignette("penalized").
    Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
     there is no package called ‘annotate’
    
    Error: processing vignette 'penalized.Rnw' failed with diagnostics:
     chunk 31 (label = globaltest)
    Error : package or namespace load failed for ‘globaltest’
    Execution halted
Flavor: r-release-osx-x86_64-mavericks