CRAN Package Check Results for Package penalizedLDA

Last updated on 2015-04-01 23:49:20.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 0.54 10.23 10.77 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 0.55 10.07 10.62 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 21.58 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 21.40 NOTE
r-devel-osx-x86_64-clang 1.0 28.98 NOTE
r-prerel-windows-ix86+x86_64 1.0 2.00 17.00 19.00 NOTE
r-prerel-linux-x86_64 1.0 0.55 10.33 10.88 NOTE
r-prerel-solaris-sparc 1.0 145.20 NOTE
r-prerel-solaris-x86 1.0 28.80 NOTE
r-release-linux-x86_64 1.0 0.61 11.76 12.37 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 2.00 23.00 25.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 3.00 21.00 24.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘flsa’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-prerel-windows-ix86+x86_64, r-prerel-linux-x86_64, r-prerel-solaris-sparc, r-prerel-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.0
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.penlda plot.penldacv predict.penlda print.penlda print.penldacv
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-prerel-linux-x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    PenalizedPCA: no visible global function definition for ‘flsa’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-prerel-windows-ix86+x86_64, r-prerel-linux-x86_64, r-prerel-solaris-sparc, r-prerel-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'PenalizedLDA.cv.Rd':
     \usage lines wider than 90 characters:
     PenalizedLDA.cv(x, y, lambdas = NULL, K = NULL, nfold = 6, folds = NULL, type = "standard", chrom = NULL, lambda2 = NULL)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-prerel-linux-x86_64, r-release-linux-x86_64

Version: 1.0
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'penalizedLDA-internal':
     ‘plot.penlda’ ‘print.penlda’ ‘plot.penldacv’ ‘print.penldacv’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-prerel-windows-ix86+x86_64, r-prerel-linux-x86_64, r-prerel-solaris-sparc, r-prerel-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘flsa’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-release-osx-x86_64-mavericks, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'penalizedLDA-internal':
     ‘plot.penlda’ ‘print.penlda’ ‘plot.penldacv’ ‘print.penldacv’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64-mavericks, r-oldrel-windows-ix86+x86_64