CRAN Package Check Results for Package pheno

Last updated on 2017-06-28 01:55:01.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6 3.26 36.16 39.43 NOTE
r-devel-linux-x86_64-debian-gcc 1.6 3.38 35.32 38.70 NOTE
r-devel-linux-x86_64-fedora-clang 1.6 89.05 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6 101.64 NOTE
r-devel-windows-ix86+x86_64 1.6 14.00 77.00 91.00 NOTE
r-patched-linux-x86_64 1.6 3.18 35.63 38.81 NOTE
r-patched-solaris-sparc 1.6 491.70 NOTE
r-patched-solaris-x86 1.6 118.40 NOTE
r-release-linux-x86_64 1.6 3.65 35.60 39.25 NOTE
r-release-windows-ix86+x86_64 1.6 12.00 104.00 116.00 NOTE
r-release-osx-x86_64 1.6 NOTE
r-oldrel-windows-ix86+x86_64 1.6 12.00 96.00 108.00 NOTE
r-oldrel-osx-x86_64 1.6 NOTE

Check Details

Version: 1.6
Check: R code for possible problems
Result: NOTE
    pheno.ddm: no visible global function definition for ‘new’
    pheno.flm.fit: no visible binding for global variable ‘na.exclude’
    pheno.flm.fit: no visible global function definition for ‘terms’
    pheno.flm.fit: no visible global function definition for ‘residuals’
    pheno.flm.fit: no visible global function definition for ‘qt’
    pheno.lad.fit: no visible binding for global variable ‘na.exclude’
    pheno.mlm.fit: no visible binding for global variable ‘na.exclude’
    pheno.mlm.fit: no visible global function definition for ‘residuals’
    Undefined global functions or variables:
     na.exclude new qt residuals terms
    Consider adding
     importFrom("methods", "new")
     importFrom("stats", "na.exclude", "qt", "residuals", "terms")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.6
Check: Rd line widths
Result: NOTE
    Rd file 'pheno.mlm.fit.Rd':
     \examples lines wider than 100 characters:
     R <- pheno.mlm.fit(DWD) # parameter estimation
     summary(tr)$coef[2] # slope of trend
     summary(tr)$coef[4] # standard error of trend
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.6
Check: compiled code
Result: NOTE
    File ‘pheno/libs/pheno.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64