CRAN Package Check Results for Package plmDE

Last updated on 2015-01-30 14:48:56.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 1.66 24.90 26.56 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 1.52 24.19 25.70 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 56.32 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 54.31 NOTE
r-devel-osx-x86_64-clang 1.0 57.93 NOTE
r-devel-windows-ix86+x86_64 1.0 7.00 35.00 42.00 NOTE
r-patched-linux-x86_64 1.0 1.72 27.29 29.01 NOTE
r-patched-solaris-sparc 1.0 338.20 NOTE
r-patched-solaris-x86 1.0 73.60 NOTE
r-release-linux-ix86 1.0 2.00 33.72 35.72 NOTE
r-release-linux-x86_64 1.0 2.36 27.78 30.14 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-osx-x86_64-snowleopard 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 6.00 44.00 50.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 6.00 60.00 66.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘R.oo’ ‘limma’ ‘splines’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.0
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     info.plmDE plmDEmodel.default hist.DEresults plot.DEresults
     head.DEresults head.plmDE
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'info.plmDE.Rd':
     \examples lines wider than 100 characters:
     DataInfo = data.frame(sample = names(ExpressionData), group = c(rep("Control", 50), rep("Diseased", 50)), weight = abs(rnorm(100, 50, 2 ... [TRUNCATED]
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘R.oo’ ‘limma’ ‘splines’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘R.oo’ ‘limma’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-release-osx-x86_64-snowleopard, r-oldrel-windows-ix86+x86_64