CRAN Package Check Results for Package postCP

Last updated on 2014-07-30 09:47:55.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7.2 1.63 18.54 20.18 NOTE
r-devel-linux-x86_64-debian-gcc 1.7.2 1.97 18.88 20.84 NOTE
r-devel-linux-x86_64-fedora-clang 1.7.2 42.50 NOTE
r-devel-linux-x86_64-fedora-gcc 1.7.2 39.78 NOTE
r-devel-osx-x86_64-clang 1.7.2 39.45 NOTE
r-devel-windows-ix86+x86_64 1.7.2 9.00 45.00 54.00 NOTE
r-patched-linux-x86_64 1.7.2 1.95 19.40 21.35 NOTE
r-patched-solaris-sparc 1.7.2 217.40 ERROR
r-patched-solaris-x86 1.7.2 50.40 ERROR
r-release-linux-ix86 1.7.2 2.80 27.20 30.00 NOTE
r-release-linux-x86_64 1.7.2 2.42 19.62 22.03 NOTE
r-release-osx-x86_64-mavericks 1.7.2 NOTE
r-release-osx-x86_64-snowleopard 1.7.2 OK
r-release-windows-ix86+x86_64 1.7.2 9.00 45.00 54.00 NOTE
r-oldrel-windows-ix86+x86_64 1.7.2 10.00 49.00 59.00 NOTE

Memtest notes: valgrind

Check Details

Version: 1.7.2
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     MASS Segmentor3IsBack
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.7.2
Check: foreign function calls
Result: NOTE
    Calls with DUP = FALSE:
     .C("postCPlev", data = as.double(data), rseg = as.integer(seg),
     nn = as.integer(n), JJ = as.integer(J), rnseg = as.integer(nseg),
     lforward = as.double(lforward), lbackward = as.double(lbackward),
     lprob = as.double(lprob), rprobs = as.integer(probs), cp = as.double(post.cp),
     bestcp = as.double(bestcp), bestlevel = as.double(best.level),
     rmu = as.double(rmu), rsigma = as.double(rsigma), cpconfint = as.double(cpconfint),
     cpvector = as.double(cpvector), levvector = as.double(levvector),
     rci = as.double(ci), rviterbi = as.integer(viterbi), rinitsegci = as.integer(initsegci),
     rnsamples = as.integer(nsamples), rmodel = as.integer(model),
     rprior = as.double(prior), rpriortype = as.integer(ptype),
     rmout = as.integer(keep), rlevelbased = as.integer(1), rverbose = as.integer(verbose),
     rdebug = as.integer(debug), DUP = FALSE, PACKAGE = "postCP")
     .C("postCP", data = as.double(data), rseg = as.integer(seg),
     nn = as.integer(n), JJ = as.integer(J), lforward = as.double(lforward),
     lbackward = as.double(lbackward), cp = as.double(post.cp),
     bestcp = as.double(bestcp), rmu = as.double(rmu), rsigma = as.double(rsigma),
     lprob = as.double(lprob), rprobs = as.integer(probs), cpconfint = as.double(cpconfint),
     cpvector = as.double(cpvector), rci = as.double(ci), rviterbi = as.integer(viterbi),
     rinitsegci = as.integer(initsegci), rnsamples = as.integer(nsamples),
     rmodel = as.integer(model), rprior = as.double(prior), rpriortype = as.integer(ptype),
     rmout = as.integer(keep), rlevelbased = as.integer(0), rverbose = as.integer(verbose),
     rdebug = as.integer(debug), DUP = FALSE, PACKAGE = "postCP")
     .C("postCPsample", rdata = data, rmu = mu, rsigma = sigma, lprob = as.double(lprob),
     rprobs = as.integer(probs), rlbackward = as.double(lbackward),
     cpvector = as.double(cpvector), levvector = as.double(levvector),
     rnsamples = as.integer(nsamples), nn = as.integer(n), JJ = as.integer(J),
     rnseg = as.integer(nseg), rmodel = as.integer(model), rprior = as.double(prior),
     rpriortype = as.integer(ptype), rlevelbased = as.integer(level.based),
     rverbose = as.integer(verbose), rlevelbased = as.integer(level.based),
     rdebug = as.integer(debug), DUP = FALSE, PACKAGE = "postCP")
     .C("viterbi2", data = as.double(data), lprob = as.double(lprob),
     rprobs = as.integer(probs), bestcp = as.double(bestcp), bestlevel = as.double(best.level),
     rprior = as.double(prior), rpriortype = as.integer(ptype),
     nn = as.integer(n), JJ = as.integer(J), rnseg = as.integer(nseg),
     rmu = as.double(rmu), rsigma = as.double(rsigma), rmodel = as.integer(model),
     level = as.integer(level.based), rverbose = as.integer(verbose),
     rdebug = as.integer(debug), DUP = FALSE, PACKAGE = "postCP")
    DUP = FALSE is deprecated and may be disabled in future versions of R.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.7.2
Check: examples
Result: ERROR
    Running examples in postCP-Ex.R failed
    The error most likely occurred in:
    
    > ### Name: postCPmodelsel
    > ### Title: Model selection for change-point data.
    > ### Aliases: postCPmodelsel
    > ### Keywords: package
    >
    > ### ** Examples
    >
    > require(postCP);
    > N=2000; x=c(rpois(N,2.0),rpois(2*N,2.2),rpois(N,1.9));
    > # estimate number of segments by ICL, AIC, BIC, mBIC assuming Poisson model
    > # choose number of segment (1 to 10) minimizing each criteria
    > postCPmodelsel(x,1:10,model=1);
    Error in cumsum(datasize)[breaks[k, 1:k]] :
     only 0's may be mixed with negative subscripts
    Calls: postCPmodelsel -> Segmentor -> Segmentor.default
    Execution halted
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86