CRAN Package Check Results for Package qPCR.CT

Last updated on 2014-12-18 11:50:13.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 0.67 9.98 10.66 NOTE
r-devel-linux-x86_64-debian-gcc 1.1 0.67 9.81 10.48 NOTE
r-devel-linux-x86_64-fedora-clang 1.1 22.66 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1 20.40 NOTE
r-devel-osx-x86_64-clang 1.1 23.90 NOTE
r-devel-windows-ix86+x86_64 1.1 3.00 18.00 21.00 NOTE
r-patched-linux-x86_64 1.1 0.69 10.04 10.74 NOTE
r-patched-solaris-sparc 1.1 127.40 NOTE
r-patched-solaris-x86 1.1 31.30 NOTE
r-release-linux-ix86 1.1 0.97 14.97 15.94 NOTE
r-release-linux-x86_64 1.1 0.86 9.68 10.54 NOTE
r-release-osx-x86_64-mavericks 1.1 NOTE
r-release-osx-x86_64-snowleopard 1.1 NOTE
r-release-windows-ix86+x86_64 1.1 3.00 18.00 21.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1 3.00 19.00 22.00 NOTE

Check Details

Version: 1.1
Check: R code for possible problems
Result: NOTE
    NB: .First.lib is obsolete and will not be used in R >= 3.0.0
    
    Calc.Expr: no visible binding for global variable ‘Type’
    Calc.Expr: no visible binding for global variable ‘Identifier’
    Calc.Expr: no visible binding for global variable ‘Fluor’
    GroupPlot: no visible binding for global variable ‘Type’
    plot.CT: no visible binding for global variable ‘tr_gene_name’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1
Check: Rd files
Result: NOTE
    prepare_Rd: Calc.Expr.Rd:38-40: Dropping empty section \details
    prepare_Rd: Calc.Expr.Rd:41-47: Dropping empty section \value
    prepare_Rd: Calc.Expr.Rd:54-56: Dropping empty section \note
    prepare_Rd: Calc.Expr.Rd:48-50: Dropping empty section \references
    prepare_Rd: Calc.Expr.Rd:60-62: Dropping empty section \seealso
    prepare_Rd: GroupPlot.Rd:34-36: Dropping empty section \details
    prepare_Rd: GroupPlot.Rd:37-43: Dropping empty section \value
    prepare_Rd: GroupPlot.Rd:50-52: Dropping empty section \note
    prepare_Rd: GroupPlot.Rd:44-46: Dropping empty section \references
    prepare_Rd: GroupPlot.Rd:56-58: Dropping empty section \seealso
    prepare_Rd: cal.CT.Rd:18-20: Dropping empty section \details
    prepare_Rd: cal.CT.Rd:21-23: Dropping empty section \source
    prepare_Rd: cal_ct.Rd:48-50: Dropping empty section \note
    prepare_Rd: cal_ct.Rd:42-44: Dropping empty section \references
    prepare_Rd: cal_ct.Rd:54-56: Dropping empty section \seealso
    prepare_Rd: filename.Rd:16-18: Dropping empty section \references
    prepare_Rd: plot.CT.Rd:25-27: Dropping empty section \details
    prepare_Rd: plot.CT.Rd:28-34: Dropping empty section \value
    prepare_Rd: plot.CT.Rd:41-43: Dropping empty section \note
    prepare_Rd: plot.CT.Rd:35-37: Dropping empty section \references
    prepare_Rd: plot.CT.Rd:47-49: Dropping empty section \seealso
    prepare_Rd: repeatnum.Rd:15-17: Dropping empty section \details
    prepare_Rd: repeatnum.Rd:18-20: Dropping empty section \source
    prepare_Rd: repeatnum.Rd:21-23: Dropping empty section \references
    prepare_Rd: tr_gene_name.Rd:15-17: Dropping empty section \details
    prepare_Rd: tr_gene_name.Rd:18-20: Dropping empty section \source
    prepare_Rd: tr_gene_name.Rd:21-23: Dropping empty section \references
    prepare_Rd: tr_group_name.Rd:15-17: Dropping empty section \details
    prepare_Rd: tr_group_name.Rd:18-20: Dropping empty section \source
    prepare_Rd: tr_group_name.Rd:21-23: Dropping empty section \references
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1
Check: Rd line widths
Result: NOTE
    Rd file 'Calc.Expr.Rd':
     \usage lines wider than 90 characters:
     Calc.Expr(filename, con_group_name, tr_group_name, con_gene_name = "18s", tr_gene_name, repeatnum = 3, ...)
    
    Rd file 'GroupPlot.Rd':
     \examples lines wider than 100 characters:
     suppressWarnings(aggdata <-aggregate.data.frame(unknown, by=list(unknown$Fluor),FUN=mean, na.rm=TRUE))
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64