Last updated on 2015-03-01 12:47:45.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.3.6 | 3.43 | 68.96 | 72.39 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.3.6 | 3.44 | 66.04 | 69.48 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.3.6 | 144.44 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.3.6 | 137.32 | NOTE | |||
| r-devel-osx-x86_64-clang | 1.3.6 | 124.21 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.3.6 | 14.00 | 98.00 | 112.00 | NOTE | |
| r-patched-linux-x86_64 | 1.3.6 | 4.91 | 84.00 | 88.91 | NOTE | |
| r-patched-solaris-sparc | 1.3.6 | 937.00 | NOTE | |||
| r-patched-solaris-x86 | 1.3.6 | 218.80 | NOTE | |||
| r-release-linux-ix86 | 1.3.6 | 5.61 | 97.22 | 102.82 | NOTE | |
| r-release-linux-x86_64 | 1.3.6 | 4.90 | 82.61 | 87.52 | NOTE | |
| r-release-osx-x86_64-mavericks | 1.3.6 | NOTE | ||||
| r-release-osx-x86_64-snowleopard | 1.3.6 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 1.3.6 | 16.00 | 124.00 | 140.00 | NOTE | |
| r-oldrel-windows-ix86+x86_64 | 1.3.6 | 15.00 | 119.00 | 134.00 | NOTE |
Version: 1.3.6
Check: DESCRIPTION meta-information
Result: NOTE
Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64
Version: 1.3.6
Check: dependencies in R code
Result: NOTE
Packages in Depends field not imported from:
‘graph’ ‘igraph’ ‘pcalg’ ‘qtl’ ‘sem’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86
Version: 1.3.6
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
c.qtlnet subset.qtlnet
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang
Version: 1.3.6
Check: R code for possible problems
Result: NOTE
adjust.pheno: no visible global function definition for ‘find.pheno’
bic.qtlnet: no visible global function definition for ‘calc.genoprob’
est.qtlnet: no visible global function definition for ‘calc.genoprob’
est.qtlnet: no visible global function definition for ‘makeqtl’
est.qtlnet: no visible global function definition for ‘fitqtl’
generate.qtl.markers: no visible global function definition for
‘makeqtl’
generate.qtl.markers: no visible global function definition for
‘find.marker’
get.graph.edges: no visible global function definition for
‘list.edge.attributes’
get.graph.edges: no visible global function definition for
‘get.edgelist’
get.graph.edges: no visible global function definition for
‘get.edge.attribute’
get.graph.vertices: no visible global function definition for
‘list.vertex.attributes’
get.graph.vertices: no visible global function definition for
‘get.vertex.attribute’
igraph.qtlnet: no visible global function definition for
‘igraph.options’
igraph.qtlnet: no visible global function definition for
‘graph.data.frame’
loci.qtlnet: no visible global function definition for ‘calc.genoprob’
lod.score: no visible global function definition for ‘qtlversion’
lod.score : myfitqtl: no visible global function definition for
‘fitqtl’
lod.score: no visible global function definition for ‘find.pheno’
log.likelihood.s: no visible global function definition for
‘find.pheno’
match.parents: no visible global function definition for ‘nind’
mcmc.qtlnet: no visible global function definition for ‘calc.genoprob’
plot.qtlnet: no visible global function definition for ‘tkplot’
pull.loci: no visible global function definition for ‘create.map’
qdg: no visible global function definition for ‘skeleton’
qdg: no visible binding for global variable ‘gaussCItest’
qdg: no visible global function definition for ‘argmax.geno’
qdg.sem : score.sem.models: no visible global function definition for
‘nind’
qdg.sem : score.sem.models: no visible global function definition for
‘sem’
qtlnet.phase1: no visible global function definition for
‘calc.genoprob’
scan.genome: no visible global function definition for ‘makeqtl’
scanone.summary: no visible global function definition for ‘scanone’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64
Version: 1.3.6
Check: dependencies in R code
Result: NOTE
Packages in Depends field not imported from:
‘graph’ ‘igraph’ ‘pcalg’ ‘qtl’ ‘sem’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
See the information on DESCRIPTION files in the chapter ‘Creating R
packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-patched-solaris-sparc, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64