CRAN Package Check Results for Package rJava

Last updated on 2014-04-18 01:47:53.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9-6 12.19 28.96 41.15 NOTE
r-devel-linux-x86_64-debian-gcc 0.9-6 12.94 28.76 41.70 NOTE
r-devel-linux-x86_64-fedora-clang 0.9-6 66.28 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9-6 62.08 NOTE
r-devel-macosx-x86_64-clang 0.9-6 70.80 NOTE
r-devel-macosx-x86_64-gcc 0.9-6 NOTE
r-devel-windows-ix86+x86_64 0.9-6 42.00 47.00 89.00 NOTE
r-patched-linux-x86_64 0.9-6 16.95 30.38 47.34 NOTE
r-patched-solaris-sparc 0.9-6 361.60 NOTE
r-patched-solaris-x86 0.9-6 84.50 NOTE
r-release-linux-ix86 0.9-6 34.00 48.00 82.00 NOTE
r-release-linux-x86_64 0.9-6 12.65 28.40 41.05 NOTE
r-release-macosx-x86_64 0.9-6 NOTE
r-release-windows-ix86+x86_64 0.9-6 82.00 64.00 146.00 NOTE
r-oldrel-windows-ix86+x86_64 0.9-6 42.00 72.00 114.00 NOTE

Check Details

Version: 0.9-6
Check: R code for possible problems
Result: NOTE
    Found the following possibly unsafe calls:
    File ‘rJava/R/import.R’:
     unlockBinding(IMPORTER, env = env)
     assignInNamespace(IMPORTER, importer, envir = env)
    File ‘rJava/R/jinit.R’:
     unlockBinding(x, .env)
     unlockBinding(x, pe)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macosx-x86_64-clang, r-devel-macosx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-macosx-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
     Found ‘stderr’, possibly from ‘stderr’ (C)
     Found ‘stdout’, possibly from ‘stdout’ (C)
    File ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/rJava/libs/rJava.so’:
     Found ‘stderr’, possibly from ‘stderr’ (C)
     Found ‘stdout’, possibly from ‘stdout’ (C)
    File ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.9-6
Check: top-level files
Result: NOTE
    Non-standard files/directories found at top level:
     ‘getsp.class’ ‘getsp.java’ ‘install-sh’ ‘jri’ ‘version’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/data/gannet/ripley/R/packages/tests-clang/rJava.Rcheck/rJava/libs/rJava.so’:
     Found ‘stderr’, possibly from ‘stderr’ (C)
     Found ‘stdout’, possibly from ‘stdout’ (C)
    File ‘/data/gannet/ripley/R/packages/tests-clang/rJava.Rcheck/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/data/gannet/ripley/R/packages/tests-devel/rJava.Rcheck/rJava/libs/rJava.so’:
     Found ‘stderr’, possibly from ‘stderr’ (C)
     Found ‘stdout’, possibly from ‘stdout’ (C)
    File ‘/data/gannet/ripley/R/packages/tests-devel/rJava.Rcheck/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/Users/ripley/R/packages/tests-devel/rJava.Rcheck/rJava/libs/rJava.so’:
     Found ‘___stderrp’, possibly from ‘stderr’ (C)
     Found ‘___stdoutp’, possibly from ‘stdout’ (C)
    File ‘/Users/ripley/R/packages/tests-devel/rJava.Rcheck/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-devel-macosx-x86_64-clang

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.2/rJava.Rcheck/rJava/libs/rJava.so’:
     Found ‘___stderrp’, possibly from ‘stderr’ (C)
     Found ‘___stdoutp’, possibly from ‘stdout’ (C)
    File ‘/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.2/rJava.Rcheck/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-devel-macosx-x86_64-gcc

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files for i386 is not available
    Note: information on .o files for x64 is not available
    File 'd:/Rcompile/CRANpkg/lib/3.2/rJava/libs/i386/rJava.dll':
     Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
    File 'd:/Rcompile/CRANpkg/lib/3.2/rJava/libs/x64/rJava.dll':
     Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
    File 'd:/Rcompile/CRANpkg/lib/3.2/rJava/libs/i386/rJava.dll':
     Found non-API call to R: 'R_GlobalContext'
    File 'd:/Rcompile/CRANpkg/lib/3.2/rJava/libs/x64/rJava.dll':
     Found non-API call to R: 'R_GlobalContext'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
    * checking examples ...
Flavor: r-devel-windows-ix86+x86_64

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
     Found ‘stderr’, possibly from ‘stderr’ (C)
     Found ‘stdout’, possibly from ‘stdout’ (C)
    File ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-patched-linux-x86_64

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/home/ripley/R/Lib32/rJava/libs/rJava.so’:
     Found ‘exit’, possibly from ‘exit’ (C)
    File ‘/home/ripley/R/Lib32/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/rJava/libs/rJava.so’:
     Found ‘stderr’, possibly from ‘stderr’ (C)
     Found ‘stdout’, possibly from ‘stdout’ (C)
    File ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/rJava/libs/rJava.so’:
     Found non-API call to R: ‘R_GlobalContext’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-release-linux-ix86, r-release-linux-x86_64

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files is not available
    File '/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/rJava.Rcheck/rJava/libs/rJava.so':
     Found '___stderrp', possibly from 'stderr' (C)
     Found '___stdoutp', possibly from 'stdout' (C)
    File '/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/rJava.Rcheck/rJava/libs/rJava.so':
     Found non-API call to R: 'R_GlobalContext'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavor: r-release-macosx-x86_64

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files for i386 is not available
    Note: information on .o files for x64 is not available
    File 'd:/Rcompile/CRANpkg/lib/3.1/rJava/libs/i386/rJava.dll':
     Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
    File 'd:/Rcompile/CRANpkg/lib/3.1/rJava/libs/x64/rJava.dll':
     Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
    File 'd:/Rcompile/CRANpkg/lib/3.1/rJava/libs/i386/rJava.dll':
     Found non-API call to R: 'R_GlobalContext'
    File 'd:/Rcompile/CRANpkg/lib/3.1/rJava/libs/x64/rJava.dll':
     Found non-API call to R: 'R_GlobalContext'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
    * checking examples ...
Flavor: r-release-windows-ix86+x86_64

Version: 0.9-6
Check: compiled code
Result: NOTE
    Note: information on .o files for i386 is not available
    Note: information on .o files for x64 is not available
    File 'd:/Rcompile/CRANpkg/lib/3.0/rJava/libs/i386/rJava.dll':
     Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
    File 'd:/Rcompile/CRANpkg/lib/3.0/rJava/libs/x64/rJava.dll':
     Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
    File 'd:/Rcompile/CRANpkg/lib/3.0/rJava/libs/i386/rJava.dll':
     Found non-API call to R: 'R_GlobalContext'
    File 'd:/Rcompile/CRANpkg/lib/3.0/rJava/libs/x64/rJava.dll':
     Found non-API call to R: 'R_GlobalContext'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console. The detected symbols
    are linked into the code but might come from libraries and not actually
    be called.
    Compiled code should not call non-API entry points in R.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
    * checking examples ...
Flavor: r-oldrel-windows-ix86+x86_64