CRAN Package Check Results for Package rcdk

Last updated on 2016-12-10 23:48:56.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.3.8 2.30 49.86 52.16 OK
r-devel-linux-x86_64-debian-gcc 3.3.8 2.13 47.96 50.08 WARN
r-devel-linux-x86_64-fedora-clang 3.3.8 124.93 OK --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 3.3.8 120.44 OK --no-stop-on-test-error
r-devel-macos-x86_64-clang 3.3.8 96.56 OK --no-stop-on-test-error
r-devel-windows-ix86+x86_64 3.3.8 8.00 127.00 135.00 OK
r-patched-linux-x86_64 3.3.8 1.82 44.76 46.58 OK
r-patched-solaris-sparc 3.3.8 344.80 ERROR
r-patched-solaris-x86 3.3.8 72.90 ERROR
r-release-linux-x86_64 3.3.8 1.73 43.63 45.36 OK
r-release-osx-x86_64-mavericks 3.3.8 ERROR
r-release-windows-ix86+x86_64 3.3.8 8.00 85.00 93.00 OK
r-oldrel-windows-ix86+x86_64 3.3.8 10.00 99.00 109.00 OK

Check Details

Version: 3.3.8
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Loading required package: fingerprint
    Segmentation fault
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.3.8
Check: examples
Result: ERROR
    Running examples in ‘rcdk-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: eval.desc
    > ### Title: Evaluate a Molecular Descriptor
    > ### Aliases: eval.desc
    > ### Keywords: programming
    >
    > ### ** Examples
    >
    > smiles <- c('CCC', 'c1ccccc1', 'CC(=O)C')
    > mols <- sapply(smiles, parse.smiles)
    >
    > dnames <- get.desc.names('constitutional')
    Error in .jcall("org/guha/rcdk/descriptors/DescriptorUtilities", "[Ljava/lang/String;", :
     RcallMethod: cannot determine object class
    Calls: get.desc.names -> .jcall -> .External
    Execution halted
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 3.3.8
Check: tests
Result: ERROR
     Running ‘doRUnit.R’ [26s/24s]
    Running the tests in ‘tests/doRUnit.R’ failed.
    Last 13 lines of output:
     ERROR in test.desc.names: Error in .jcall("org/guha/rcdk/descriptors/DescriptorUtilities", "[Ljava/lang/String;", :
     RcallMethod: cannot determine object class
     ERROR in test.fp: Error in .jcall("org/openscience/cdk/DefaultChemObjectBuilder", "Lorg/openscience/cdk/interfaces/IChemObjectBuilder;", :
     java.lang.UnsupportedClassVersionError: org/guha/rcdk/descriptors/DescriptorUtilities : Unsupported major.minor version 52.0
     ERROR in test.get.smiles: Error in .jcall("org/guha/rcdk/util/Misc", "S", "getSmiles", molecule, :
     RcallMethod: cannot determine object class
     ERROR in test.get.smiles2: Error in .jcall("org/openscience/cdk/DefaultChemObjectBuilder", "Lorg/openscience/cdk/interfaces/IChemObjectBuilder;", :
     java.lang.UnsupportedClassVersionError: org/guha/rcdk/util/Misc : Unsupported major.minor version 52.0
     Error:
    
     unit testing failed (#test failures: 0, #R errors: 12)
    
     Execution halted
Flavor: r-patched-solaris-sparc

Version: 3.3.8
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Loading required package: fingerprint
    
    Error: processing vignette 'rcdk.Rnw' failed with diagnostics:
     chunk 11
    Error in .jcall("org/guha/rcdk/util/Misc", "S", "getSmiles", molecule, :
     RcallMethod: cannot determine object class
    Execution halted
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 3.3.8
Check: tests
Result: ERROR
     Running ‘doRUnit.R’
    Running the tests in ‘tests/doRUnit.R’ failed.
    Last 13 lines of output:
     ERROR in test.desc.names: Error in .jcall("org/guha/rcdk/descriptors/DescriptorUtilities", "[Ljava/lang/String;", :
     RcallMethod: cannot determine object class
     ERROR in test.fp: Error in .jcall("org/openscience/cdk/DefaultChemObjectBuilder", "Lorg/openscience/cdk/interfaces/IChemObjectBuilder;", :
     java.lang.UnsupportedClassVersionError: org/guha/rcdk/descriptors/DescriptorUtilities : Unsupported major.minor version 52.0
     ERROR in test.get.smiles: Error in .jcall("org/guha/rcdk/util/Misc", "S", "getSmiles", molecule, :
     RcallMethod: cannot determine object class
     ERROR in test.get.smiles2: Error in .jcall("org/openscience/cdk/DefaultChemObjectBuilder", "Lorg/openscience/cdk/interfaces/IChemObjectBuilder;", :
     java.lang.UnsupportedClassVersionError: org/guha/rcdk/util/Misc : Unsupported major.minor version 52.0
     Error:
    
     unit testing failed (#test failures: 0, #R errors: 12)
    
     Execution halted
Flavor: r-patched-solaris-x86

Version: 3.3.8
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-release-osx-x86_64-mavericks