CRAN Package Check Results for Package remix

Last updated on 2015-07-31 06:47:10.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1 1.88 23.62 25.50 NOTE
r-devel-linux-x86_64-debian-gcc 2.1 1.97 22.98 24.95 NOTE
r-devel-linux-x86_64-fedora-clang 2.1 52.37 NOTE
r-devel-linux-x86_64-fedora-gcc 2.1 48.27 NOTE
r-devel-osx-x86_64-clang 2.1 45.26 NOTE
r-devel-windows-ix86+x86_64 2.1 9.00 41.00 50.00 NOTE
r-patched-linux-x86_64 2.1 1.88 23.52 25.40 NOTE
r-patched-solaris-sparc 2.1 312.50 NOTE
r-patched-solaris-x86 2.1 73.40 NOTE
r-release-linux-x86_64 2.1 1.83 23.64 25.47 NOTE
r-release-osx-x86_64-mavericks 2.1 NOTE
r-release-windows-ix86+x86_64 2.1 14.00 44.00 58.00 NOTE
r-oldrel-windows-ix86+x86_64 2.1 15.00 80.00 95.00 NOTE

Check Details

Version: 2.1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘plyr’ ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    ':::' call which should be '::': ‘Hmisc:::label.default’
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     as.data.frame.correlation as.data.frame.freq as.data.frame.summarize
     as.data.frame.summarize.by as.data.frame.survival
     as.data.frame.tabular
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 2.1
Check: R code for possible problems
Result: NOTE
    correlation: no visible global function definition for ‘cor.test’
    cross: no visible binding for global variable ‘sd’
    cross: no visible binding for global variable ‘quantile’
    cross: no visible binding for global variable ‘is.Surv’
    cross_list: no visible binding for global variable ‘sd’
    cross_list: no visible binding for global variable ‘quantile’
    elements: no visible global function definition for ‘as.formula’
    expand_formula: no visible global function definition for ‘as.formula’
    is.numeric.and.not.surv: no visible global function definition for
     ‘is.Surv’
    left_right: no visible global function definition for ‘as.formula’
    left_right: no visible global function definition for ‘terms’
    parse_data: no visible global function definition for ‘model.frame’
    remix: no visible binding for global variable ‘sd’
    remix: no visible binding for global variable ‘quantile’
    remix: no visible global function definition for ‘is.formula’
    remix : <anonymous>: no visible global function definition for
     ‘is.Surv’
    remix: no visible binding for global variable ‘is.Surv’
    remix: no visible global function definition for ‘llply’
    summarize: no visible binding for global variable ‘sd’
    summarize: no visible binding for global variable ‘quantile’
    summarize.by: no visible binding for global variable ‘sd’
    summarize.by: no visible binding for global variable ‘quantile’
    summarize.by: no visible global function definition for ‘dlply’
    summarize.by: no visible global function definition for ‘.’
    summarize.data.frame: no visible binding for global variable ‘sd’
    summarize.data.frame: no visible binding for global variable ‘quantile’
    summarize.data.frame.by: no visible binding for global variable ‘sd’
    summarize.data.frame.by: no visible binding for global variable
     ‘quantile’
    summarize.data.frame.by: no visible global function definition for
     ‘dlply’
    summarize.data.frame.by : <anonymous>: no visible global function
     definition for ‘stack’
    survival: no visible global function definition for ‘as.formula’
    survival: no visible global function definition for ‘survfit’
    survival: no visible global function definition for ‘model.frame’
    survival: no visible global function definition for ‘daply’
    survival: no visible global function definition for ‘.’
    test.summarize.auto : <anonymous>: no visible global function
     definition for ‘shapiro.test’
    test.summarize.auto: no visible global function definition for
     ‘bartlett.test’
    test.summarize.auto: no visible global function definition for
     ‘kruskal.test’
    test.summarize.auto: no visible global function definition for
     ‘oneway.test’
    test.summarize.kruskal: no visible global function definition for
     ‘kruskal.test’
    test.summarize.oneway.equalvar: no visible global function definition
     for ‘oneway.test’
    test.summarize.oneway.unequalvar: no visible global function definition
     for ‘oneway.test’
    test.survival.logrank: no visible global function definition for
     ‘survdiff’
    test.survival.logrank: no visible global function definition for
     ‘pchisq’
    test.tabular.auto: no visible global function definition for
     ‘chisq.test’
    test.tabular.auto: no visible global function definition for
     ‘fisher.test’
    test.tabular.fisher: no visible global function definition for
     ‘fisher.test’
    Undefined global functions or variables:
     . as.formula bartlett.test chisq.test cor.test daply dlply
     fisher.test is.Surv is.formula kruskal.test llply model.frame
     oneway.test pchisq quantile sd shapiro.test stack survdiff survfit
     terms
    Consider adding
     importFrom("stats", "as.formula", "bartlett.test", "chisq.test",
     "cor.test", "fisher.test", "kruskal.test", "model.frame",
     "oneway.test", "pchisq", "quantile", "sd", "shapiro.test",
     "terms")
     importFrom("utils", "stack")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2.1
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'as.data.frame.correlation':
     ‘as.data.frame.correlation’
    
    S3 methods shown with full name in documentation object 'as.data.frame.freq':
     ‘as.data.frame.freq’
    
    S3 methods shown with full name in documentation object 'as.data.frame.summarize':
     ‘as.data.frame.summarize’
    
    S3 methods shown with full name in documentation object 'as.data.frame.summarize.by':
     ‘as.data.frame.summarize.by’
    
    S3 methods shown with full name in documentation object 'as.data.frame.survival':
     ‘as.data.frame.survival’
    
    S3 methods shown with full name in documentation object 'as.data.frame.tabular':
     ‘as.data.frame.tabular’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.1
Check: R code for possible problems
Result: NOTE
    cross: no visible binding for global variable ‘is.Surv’
    is.numeric.and.not.surv: no visible global function definition for
     ‘is.Surv’
    remix: no visible global function definition for ‘is.formula’
    remix : <anonymous>: no visible global function definition for
     ‘is.Surv’
    remix: no visible binding for global variable ‘is.Surv’
    remix: no visible global function definition for ‘llply’
    summarize.by: no visible global function definition for ‘dlply’
    summarize.by: no visible global function definition for ‘.’
    summarize.data.frame.by: no visible global function definition for
     ‘dlply’
    survival: no visible global function definition for ‘survfit’
    survival: no visible global function definition for ‘daply’
    survival: no visible global function definition for ‘.’
    test.survival.logrank: no visible global function definition for
     ‘survdiff’
    Undefined global functions or variables:
     . daply dlply is.Surv is.formula llply survdiff survfit
Flavor: r-devel-osx-x86_64-clang

Version: 2.1
Check: R code for possible problems
Result: NOTE
    cross: no visible binding for global variable ‘is.Surv’
    is.numeric.and.not.surv: no visible global function definition for
     ‘is.Surv’
    remix: no visible global function definition for ‘is.formula’
    remix : <anonymous>: no visible global function definition for
     ‘is.Surv’
    remix: no visible binding for global variable ‘is.Surv’
    remix: no visible global function definition for ‘llply’
    summarize.by: no visible global function definition for ‘dlply’
    summarize.by: no visible global function definition for ‘.’
    summarize.data.frame.by: no visible global function definition for
     ‘dlply’
    survival: no visible global function definition for ‘survfit’
    survival: no visible global function definition for ‘daply’
    survival: no visible global function definition for ‘.’
    test.survival.logrank: no visible global function definition for
     ‘survdiff’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64