CRAN Package Check Results for Package remix

Last updated on 2015-07-03 09:47:13.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1 1.84 23.06 24.90 NOTE
r-devel-linux-x86_64-debian-gcc 2.1 1.87 23.46 25.33 NOTE
r-devel-linux-x86_64-fedora-clang 2.1 50.18 NOTE
r-devel-linux-x86_64-fedora-gcc 2.1 47.57 NOTE
r-devel-osx-x86_64-clang 2.1 42.85 NOTE
r-devel-windows-ix86+x86_64 2.1 10.00 38.00 48.00 NOTE
r-patched-linux-x86_64 2.1 1.81 23.42 25.23 NOTE
r-patched-solaris-sparc 2.1 298.20 NOTE
r-patched-solaris-x86 2.1 70.90 NOTE
r-release-linux-x86_64 2.1 1.85 23.66 25.50 NOTE
r-release-osx-x86_64-mavericks 2.1 NOTE
r-release-windows-ix86+x86_64 2.1 9.00 45.00 54.00 NOTE
r-oldrel-windows-ix86+x86_64 2.1 16.00 75.00 91.00 NOTE

Check Details

Version: 2.1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘plyr’ ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    ':::' call which should be '::': ‘Hmisc:::label.default’
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     as.data.frame.correlation as.data.frame.freq as.data.frame.summarize
     as.data.frame.summarize.by as.data.frame.survival
     as.data.frame.tabular
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 2.1
Check: R code for possible problems
Result: NOTE
    correlation: no visible global function definition for ‘cor.test’
    cross: no visible binding for global variable ‘sd’
    cross: no visible binding for global variable ‘quantile’
    cross: no visible binding for global variable ‘is.Surv’
    cross_list: no visible binding for global variable ‘sd’
    cross_list: no visible binding for global variable ‘quantile’
    elements: no visible global function definition for ‘as.formula’
    expand_formula: no visible global function definition for ‘as.formula’
    is.numeric.and.not.surv: no visible global function definition for
     ‘is.Surv’
    left_right: no visible global function definition for ‘as.formula’
    left_right: no visible global function definition for ‘terms’
    parse_data: no visible global function definition for ‘model.frame’
    remix: no visible binding for global variable ‘sd’
    remix: no visible binding for global variable ‘quantile’
    remix: no visible global function definition for ‘is.formula’
    remix : <anonymous>: no visible global function definition for
     ‘is.Surv’
    remix: no visible binding for global variable ‘is.Surv’
    remix: no visible global function definition for ‘llply’
    summarize: no visible binding for global variable ‘sd’
    summarize: no visible binding for global variable ‘quantile’
    summarize.by: no visible binding for global variable ‘sd’
    summarize.by: no visible binding for global variable ‘quantile’
    summarize.by: no visible global function definition for ‘dlply’
    summarize.by: no visible global function definition for ‘.’
    summarize.data.frame: no visible binding for global variable ‘sd’
    summarize.data.frame: no visible binding for global variable ‘quantile’
    summarize.data.frame.by: no visible binding for global variable ‘sd’
    summarize.data.frame.by: no visible binding for global variable
     ‘quantile’
    summarize.data.frame.by: no visible global function definition for
     ‘dlply’
    summarize.data.frame.by : <anonymous>: no visible global function
     definition for ‘stack’
    survival: no visible global function definition for ‘as.formula’
    survival: no visible global function definition for ‘survfit’
    survival: no visible global function definition for ‘model.frame’
    survival: no visible global function definition for ‘daply’
    survival: no visible global function definition for ‘.’
    test.summarize.auto : <anonymous>: no visible global function
     definition for ‘shapiro.test’
    test.summarize.auto: no visible global function definition for
     ‘bartlett.test’
    test.summarize.auto: no visible global function definition for
     ‘kruskal.test’
    test.summarize.auto: no visible global function definition for
     ‘oneway.test’
    test.summarize.kruskal: no visible global function definition for
     ‘kruskal.test’
    test.summarize.oneway.equalvar: no visible global function definition
     for ‘oneway.test’
    test.summarize.oneway.unequalvar: no visible global function definition
     for ‘oneway.test’
    test.survival.logrank: no visible global function definition for
     ‘survdiff’
    test.survival.logrank: no visible global function definition for
     ‘pchisq’
    test.tabular.auto: no visible global function definition for
     ‘chisq.test’
    test.tabular.auto: no visible global function definition for
     ‘fisher.test’
    test.tabular.fisher: no visible global function definition for
     ‘fisher.test’
    Undefined global functions or variables:
     . as.formula bartlett.test chisq.test cor.test daply dlply
     fisher.test is.Surv is.formula kruskal.test llply model.frame
     oneway.test pchisq quantile sd shapiro.test stack survdiff survfit
     terms
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2.1
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'as.data.frame.correlation':
     ‘as.data.frame.correlation’
    
    S3 methods shown with full name in documentation object 'as.data.frame.freq':
     ‘as.data.frame.freq’
    
    S3 methods shown with full name in documentation object 'as.data.frame.summarize':
     ‘as.data.frame.summarize’
    
    S3 methods shown with full name in documentation object 'as.data.frame.summarize.by':
     ‘as.data.frame.summarize.by’
    
    S3 methods shown with full name in documentation object 'as.data.frame.survival':
     ‘as.data.frame.survival’
    
    S3 methods shown with full name in documentation object 'as.data.frame.tabular':
     ‘as.data.frame.tabular’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.1
Check: R code for possible problems
Result: NOTE
    cross: no visible binding for global variable ‘is.Surv’
    is.numeric.and.not.surv: no visible global function definition for
     ‘is.Surv’
    remix: no visible global function definition for ‘is.formula’
    remix : <anonymous>: no visible global function definition for
     ‘is.Surv’
    remix: no visible binding for global variable ‘is.Surv’
    remix: no visible global function definition for ‘llply’
    summarize.by: no visible global function definition for ‘dlply’
    summarize.by: no visible global function definition for ‘.’
    summarize.data.frame.by: no visible global function definition for
     ‘dlply’
    survival: no visible global function definition for ‘survfit’
    survival: no visible global function definition for ‘daply’
    survival: no visible global function definition for ‘.’
    test.survival.logrank: no visible global function definition for
     ‘survdiff’
    Undefined global functions or variables:
     . daply dlply is.Surv is.formula llply survdiff survfit
Flavor: r-devel-osx-x86_64-clang

Version: 2.1
Check: R code for possible problems
Result: NOTE
    cross: no visible binding for global variable ‘is.Surv’
    is.numeric.and.not.surv: no visible global function definition for
     ‘is.Surv’
    remix: no visible global function definition for ‘is.formula’
    remix : <anonymous>: no visible global function definition for
     ‘is.Surv’
    remix: no visible binding for global variable ‘is.Surv’
    remix: no visible global function definition for ‘llply’
    summarize.by: no visible global function definition for ‘dlply’
    summarize.by: no visible global function definition for ‘.’
    summarize.data.frame.by: no visible global function definition for
     ‘dlply’
    survival: no visible global function definition for ‘survfit’
    survival: no visible global function definition for ‘daply’
    survival: no visible global function definition for ‘.’
    test.survival.logrank: no visible global function definition for
     ‘survdiff’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64