CRAN Package Check Results for Package rsgcc

Last updated on 2014-04-23 12:48:27.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.6 7.34 81.89 89.22 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.6 7.97 81.31 89.28 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.6 195.63 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.6 186.74 NOTE
r-devel-osx-x86_64-clang 1.0.6 175.11 NOTE
r-devel-osx-x86_64-gcc 1.0.6 ERROR
r-devel-windows-ix86+x86_64 1.0.6 27.00 144.00 171.00 NOTE
r-patched-linux-x86_64 1.0.6 7.89 80.74 88.62 NOTE
r-patched-solaris-sparc 1.0.6 1045.70 NOTE
r-patched-solaris-x86 1.0.6 255.50 NOTE
r-release-linux-ix86 1.0.6 12.00 132.00 144.00 NOTE
r-release-linux-x86_64 1.0.6 7.64 81.06 88.71 NOTE
r-release-osx-x86_64-mavericks 1.0.6 ERROR
r-release-osx-x86_64-snowleopard 1.0.6 ERROR
r-release-windows-ix86+x86_64 1.0.6 29.00 147.00 176.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0.6 33.00 154.00 187.00 NOTE

Check Details

Version: 1.0.6
Check: package dependencies
Result: NOTE
    Depends: includes the non-default packages:
     ‘biwt’ ‘cairoDevice’ ‘fBasics’ ‘gplots’ ‘gWidgets’ ‘gWidgetsRGtk2’
     ‘minerva’ ‘parmigene’ ‘stringr’ ‘snowfall’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 1.0.6
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘grDevices’ ‘snowfall’
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘biwt’ ‘cairoDevice’ ‘fBasics’ ‘gWidgets’ ‘gWidgetsRGtk2’ ‘gplots’
     ‘minerva’ ‘parmigene’ ‘snowfall’ ‘stringr’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.6
Check: R code for possible problems
Result: NOTE
    gcc.heatmap: no visible global function definition for ‘invalid’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 1.0.6
Check: package dependencies
Result: ERROR
    Package required but not available: ‘biwt’
    
    Package suggested but not available for checking: ‘ctc’
    
    Depends: includes the non-default packages:
     ‘biwt’ ‘cairoDevice’ ‘fBasics’ ‘gplots’ ‘gWidgets’ ‘gWidgetsRGtk2’
     ‘minerva’ ‘parmigene’ ‘stringr’ ‘snowfall’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-devel-osx-x86_64-gcc

Version: 1.0.6
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'bigmemory'
    
    Depends: includes the non-default packages:
     'biwt' 'cairoDevice' 'fBasics' 'gplots' 'gWidgets' 'gWidgetsRGtk2'
     'minerva' 'parmigene' 'stringr' 'snowfall'
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 1.0.6
Check: R code for possible problems
Result: NOTE
    .cor_all: no visible global function definition for 'as.big.matrix'
    adjacencymatrix: no visible global function definition for
     'as.big.matrix'
    gcc.heatmap: no visible global function definition for 'invalid'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.6
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘ctc’
    
    Depends: includes the non-default packages:
     ‘biwt’ ‘cairoDevice’ ‘fBasics’ ‘gplots’ ‘gWidgets’ ‘gWidgetsRGtk2’
     ‘minerva’ ‘parmigene’ ‘stringr’ ‘snowfall’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-snowleopard

Version: 1.0.6
Check: R code for possible problems
Result: NOTE
    gcc.heatmap: no visible global function definition for ‘invalid’
    rsgcc.gui : saveData: no visible global function definition for ‘r2atr’
    rsgcc.gui : saveData: no visible global function definition for ‘r2gtr’
    rsgcc.gui : saveData: no visible global function definition for ‘r2cdt’
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.0.6
Check: package dependencies
Result: ERROR
    Packages required but not available: ‘cairoDevice’ ‘gWidgetsRGtk2’
    
    Package suggested but not available for checking: ‘ctc’
    
    Depends: includes the non-default packages:
     ‘biwt’ ‘cairoDevice’ ‘fBasics’ ‘gplots’ ‘gWidgets’ ‘gWidgetsRGtk2’
     ‘minerva’ ‘parmigene’ ‘stringr’ ‘snowfall’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0.6
Check: whether package can be installed
Result: ERROR
    Installation failed.
    See ‘/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/rsgcc.Rcheck/00install.out’ for details.
Flavor: r-release-osx-x86_64-snowleopard

Version: 1.0.6
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'bigmemory'
Flavor: r-oldrel-windows-ix86+x86_64