CRAN Package Check Results for Package seqMeta

Last updated on 2017-01-23 14:48:30.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.6 4.39 158.06 162.45 OK
r-devel-linux-x86_64-debian-gcc 1.6.6 4.30 151.90 156.19 OK
r-devel-linux-x86_64-fedora-clang 1.6.6 295.82 OK --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 1.6.6 288.20 OK --no-stop-on-test-error
r-devel-macos-x86_64-clang 1.6.6 196.71 OK --no-stop-on-test-error
r-devel-windows-ix86+x86_64 1.6.6 13.00 334.00 347.00 OK
r-patched-linux-x86_64 1.6.6 4.28 149.56 153.84 OK
r-patched-solaris-sparc 1.6.6 1694.30 OK
r-patched-solaris-x86 1.6.6 325.30 OK
r-release-linux-x86_64 1.6.6 4.44 147.02 151.47 OK
r-release-osx-x86_64-mavericks 1.6.6 OK
r-release-windows-ix86+x86_64 1.6.6 32.00 390.00 422.00 OK
r-oldrel-windows-ix86+x86_64 1.6.6 36.00 371.00 407.00 ERROR

Check Details

Version: 1.6.6
Check: running R code from vignettes
Result: ERROR
    Errors in running code in vignettes:
    when running code in 'seqMeta.Rnw'
     ...
    6 gene13 0.214 0.211 0.17 0.31 0.0163 22 2 600
    
    > meta.skato.results <- skatOMeta(c1, c2, rho = seq(0,
    + 1, length = 11), burden.wts = function(maf) {
    + dbeta(maf, 1, 25)
    + }, SNPInfo = SNP .... [TRUNCATED]
    
     When sourcing 'seqMeta.R':
    Error: replacement has length zero
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 1.6.6
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: survival
    Note: method with signature 'CsparseMatrix#Matrix#missing#replValue' chosen for function '[<-',
     target signature 'dsCMatrix#lsyMatrix#missing#numeric'.
     "Matrix#ldenseMatrix#missing#replValue" would also be valid
    
    Error: processing vignette 'seqMeta.Rnw' failed with diagnostics:
     chunk 9
    Error in ps[i] <- tmpP$p : replacement has length zero
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64