CRAN Package Check Results for Package siar

Last updated on 2014-09-20 23:48:12.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.2 5.20 46.71 51.91 NOTE
r-devel-linux-x86_64-debian-gcc 4.2 5.55 46.57 52.12 NOTE
r-devel-linux-x86_64-fedora-clang 4.2 123.14 NOTE
r-devel-linux-x86_64-fedora-gcc 4.2 117.27 NOTE
r-devel-osx-x86_64-clang 4.2 97.03 NOTE
r-devel-windows-ix86+x86_64 4.2 19.00 88.00 107.00 NOTE
r-patched-linux-x86_64 4.2 5.70 50.62 56.32 NOTE
r-patched-solaris-sparc 4.2 681.20 NOTE
r-patched-solaris-x86 4.2 162.50 NOTE
r-release-linux-ix86 4.2 6.88 68.07 74.95 NOTE
r-release-linux-x86_64 4.2 5.76 51.78 57.54 NOTE
r-release-osx-x86_64-mavericks 4.2 NOTE
r-release-osx-x86_64-snowleopard 4.2 NOTE
r-release-windows-ix86+x86_64 4.2 20.00 95.00 115.00 NOTE
r-oldrel-windows-ix86+x86_64 4.2 20.00 91.00 111.00 NOTE

Check Details

Version: 4.2
Check: package dependencies
Result: NOTE
    Depends: includes the non-default packages:
     ‘hdrcde’ ‘coda’ ‘MASS’ ‘bayesm’ ‘mnormt’ ‘spatstat’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64

Version: 4.2
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘MASS’ ‘bayesm’ ‘coda’ ‘hdrcde’ ‘mnormt’ ‘spatstat’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 4.2
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘newgraphwindow’
    Found the platform-specific devices:
     ‘quartz’ ‘windows’ ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    bayesMVN: no visible global function definition for ‘rmultireg’
    bayestwoNorm: no visible global function definition for ‘runireg’
    overlap: no visible global function definition for ‘overlap.xypolygon’
    panelcontour: no visible global function definition for ‘kde2d’
    siardensityplot: no visible global function definition for ‘hdr’
    siarhdrs: no visible global function definition for ‘hdr’
    siarhdrs: no visible global function definition for ‘geweke.diag’
    siarproportionbygroupplot: no visible global function definition for
     ‘hdr’
    siarproportionbysourceplot: no visible global function definition for
     ‘hdr’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 4.2
Check: Rd line widths
Result: NOTE
    Rd file 'siarmcmcdirichletv4.Rd':
     \usage lines wider than 90 characters:
     siarmcmcdirichletv4(data, sources, corrections = 0, concdep = 0, iterations=200000, burnin=50000, howmany=10000, thinby=15, prior = rep ... [TRUNCATED]
    
    Rd file 'siarplotdata.Rd':
     \usage lines wider than 90 characters:
     siarplotdata(siardata, siarversion = 0, grp=1:siardata$numgroups,panel=NULL,isos=c(0,0),leg=1)
    
    Rd file 'siarproportionbygroupplot.Rd':
     \usage lines wider than 90 characters:
     siarproportionbygroupplot(siardata, siarversion=0,probs=c(95,75,50),xlabels=NULL, grp=NULL, type="boxes",clr=gray((9:1)/10),scl=1,xspc= ... [TRUNCATED]
    
    Rd file 'siarproportionbysourceplot.Rd':
     \usage lines wider than 90 characters:
     siarproportionbysourceplot(siardata, siarversion=0,probs=c(95,75,50),xlabels=NULL, grp=NULL, type="boxes",clr=gray((9:1)/10),scl=1,xspc ... [TRUNCATED]
    
    Rd file 'siarsolomcmcv4.Rd':
     \usage lines wider than 90 characters:
     siarsolomcmcv4(data, sources, corrections = 0, concdep = 0, iterations=200000, burnin=50000, howmany=10000, thinby=15, prior = rep(1, n ... [TRUNCATED]
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 4.2
Check: R code for possible problems
Result: NOTE
    bayesMVN: no visible global function definition for 'rmultireg'
    bayestwoNorm: no visible global function definition for 'runireg'
    overlap: no visible global function definition for 'overlap.xypolygon'
    panelcontour: no visible global function definition for 'kde2d'
    siardensityplot: no visible global function definition for 'hdr'
    siarhdrs: no visible global function definition for 'hdr'
    siarhdrs: no visible global function definition for 'geweke.diag'
    siarproportionbygroupplot: no visible global function definition for
     'hdr'
    siarproportionbysourceplot: no visible global function definition for
     'hdr'
Flavor: r-devel-windows-ix86+x86_64

Version: 4.2
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘newgraphwindow’
    Found the platform-specific devices:
     ‘quartz’ ‘windows’ ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64