CRAN Package Check Results for Package skatMeta

Last updated on 2014-08-29 13:48:17.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4.3 5.26 115.93 121.18 NOTE
r-devel-linux-x86_64-debian-gcc 1.4.3 5.31 112.50 117.82 NOTE
r-devel-linux-x86_64-fedora-clang 1.4.3 275.29 NOTE
r-devel-linux-x86_64-fedora-gcc 1.4.3 266.27 NOTE
r-devel-osx-x86_64-clang 1.4.3 199.49 NOTE
r-devel-windows-ix86+x86_64 1.4.3 19.00 208.00 227.00 NOTE
r-patched-linux-x86_64 1.4.3 5.50 118.48 123.98 NOTE
r-patched-solaris-sparc 1.4.3 1642.10 NOTE
r-patched-solaris-x86 1.4.3 348.50 NOTE
r-release-linux-ix86 1.4.3 6.72 156.50 163.22 NOTE
r-release-linux-x86_64 1.4.3 5.43 120.20 125.63 NOTE
r-release-osx-x86_64-mavericks 1.4.3 NOTE
r-release-osx-x86_64-snowleopard 1.4.3 NOTE
r-release-windows-ix86+x86_64 1.4.3 22.00 198.00 220.00 NOTE
r-oldrel-windows-ix86+x86_64 1.4.3 20.00 206.00 226.00 NOTE

Check Details

Version: 1.4.3
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘coxme’ ‘survival’
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘CompQuadForm’ ‘Matrix’ ‘coxme’ ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    ':::' call which should be '::': ‘coxme:::lmekin’
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.4.3
Check: R code for possible problems
Result: NOTE
    pchisqsum2: no visible global function definition for ‘davies’
    pchisqsum2: no visible global function definition for ‘farebrother’
    pchisqsum2: no visible global function definition for ‘liu’
    skatCoxCohort: no visible global function definition for ‘coxph’
    skatCoxCohort : <anonymous>: no visible global function definition for
     ‘coxph.control’
    skatFamCohort: no visible global function definition for ‘Matrix’
    skatFamCohort: no visible global function definition for
     ‘forceSymmetric’
    skatFamCohort: no visible global function definition for ‘Diagonal’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.4.3
Check: files in ‘vignettes’
Result: NOTE
    The following files look like leftovers/mistakes:
     ‘skatMeta.bbl’
    Please remove them from your package.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.4.3
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     'coxme' 'survival'
     Please remove these calls from your code.
    ':::' call which should be '::': 'coxme:::lmekin'
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
Flavor: r-release-osx-x86_64-snowleopard