CRAN Package Check Results for Package spacodiR

Last updated on 2014-07-30 03:48:28.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.13.0115 5.43 31.43 36.86 NOTE
r-devel-linux-x86_64-debian-gcc 0.13.0115 6.52 32.63 39.14 NOTE
r-devel-linux-x86_64-fedora-clang 0.13.0115 83.25 NOTE
r-devel-linux-x86_64-fedora-gcc 0.13.0115 78.45 NOTE
r-devel-osx-x86_64-clang 0.13.0115 65.45 NOTE
r-devel-windows-ix86+x86_64 0.13.0115 27.00 77.00 104.00 NOTE
r-patched-linux-x86_64 0.13.0115 6.42 32.01 38.43 NOTE
r-patched-solaris-sparc 0.13.0115 455.50 NOTE
r-patched-solaris-x86 0.13.0115 100.50 NOTE
r-release-linux-ix86 0.13.0115 8.15 41.80 49.95 NOTE
r-release-linux-x86_64 0.13.0115 6.46 32.51 38.96 NOTE
r-release-osx-x86_64-mavericks 0.13.0115 NOTE
r-release-osx-x86_64-snowleopard 0.13.0115 OK
r-release-windows-ix86+x86_64 0.13.0115 26.00 79.00 105.00 NOTE
r-oldrel-windows-ix86+x86_64 0.13.0115 26.00 80.00 106.00 NOTE

Memtest notes: valgrind

Check Details

Version: 0.13.0115
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     Rcpp colorspace picante
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.13.0115
Check: Rd line widths
Result: NOTE
    Rd file 'phy.dotplot.Rd':
     \usage lines wider than 90 characters:
     phy.dotplot(sp.plot, phy, edge.width = 0.2, lab.adj = c(0, 0), tips.adj = c(0.5, 3), tips.cex = 1.0, pch = 21, print.labs = FALSE, outf ... [TRUNCATED]
    
    Rd file 'spacodi.by.nodes.Rd':
     \usage lines wider than 90 characters:
     spacodi.by.nodes(sp.plot, phy, sp.parm = "Bst", obs.only = FALSE, return.all = TRUE, n.rep = 10, method = "1s", parm = NULL, dmat = NUL ... [TRUNCATED]
    
    Rd file 'spacodi.calc.Rd':
     \usage lines wider than 90 characters:
     spacodi.calc(sp.plot, phy = NULL, sp.traits = NULL, all.together = TRUE, prune = TRUE, pairwise = FALSE, ...)
    
    Rd file 'spacodi.permutplot.Rd':
     \usage lines wider than 90 characters:
     spacodi.permutplot(spacodi.permutations, cex=list(pch=1.5, rand=0.1, node=0.5, legend=0.75), transp=0.8, col = list("black", "lightgr ... [TRUNCATED]
     bg = list("white", "lightgray", "black"), all.points = TRUE, add.id = TRUE, sig.plot = TRUE, cut.off = 0.05, envelope = FALSE, outfil ... [TRUNCATED]
    
    Rd file 'spacodi.treeplot.Rd':
     \usage lines wider than 90 characters:
     spacodi.treeplot(spacodi.permutations, phy, cex=list(pch = 1.5, tip = 0.5, legend = 0.75), transp=0.8, sig.plot = TRUE, cut.off = 0.05, ... [TRUNCATED]
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc