CRAN Package Check Results for Package sparcl

Last updated on 2014-07-23 12:47:36.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.3 0.82 17.50 18.33 OK
r-devel-linux-x86_64-debian-gcc 1.0.3 0.81 17.12 17.93 OK
r-devel-linux-x86_64-fedora-clang 1.0.3 37.18 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.3 34.17 NOTE
r-devel-osx-x86_64-clang 1.0.3 34.51 OK
r-devel-windows-ix86+x86_64 1.0.3 4.00 43.00 47.00 OK
r-patched-linux-x86_64 1.0.3 0.82 17.37 18.19 OK
r-patched-solaris-sparc 1.0.3 237.60 OK
r-patched-solaris-x86 1.0.3 52.30 OK
r-release-linux-ix86 1.0.3 1.33 28.91 30.24 OK
r-release-linux-x86_64 1.0.3 0.87 17.38 18.24 OK
r-release-osx-x86_64-mavericks 1.0.3 OK
r-release-windows-ix86+x86_64 1.0.3 7.00 53.00 60.00 OK
r-oldrel-windows-ix86+x86_64 1.0.3 6.00 40.00 46.00 OK

Check Details

Version: 1.0.3
Check: Rd line widths
Result: NOTE
    Rd file 'ColorDendrogram.Rd':
     \usage lines wider than 90 characters:
     ColorDendrogram(hc, y, main = "", branchlength = 0.7, labels = NULL, xlab = NULL, sub = NULL, ylab = "", cex.main = NULL)
    
    Rd file 'HierarchicalSparseCluster.Rd':
     \usage lines wider than 90 characters:
     HierarchicalSparseCluster(x=NULL, dists=NULL,method=c("average","complete", "single","centroid"),
     wbound=NULL,niter=15,dissimilarity=c("squared.distance","absolute.value"), uorth=NULL,silent=FALSE,
     \examples lines wider than 100 characters:
     # faster than sparsehc <- HierarchicalSparseCluster(x=x,wbound=perm.out$bestw, method="complete")
     sparsehc <- HierarchicalSparseCluster(dists=perm.out$dists, wbound=perm.out$bestw, method="complete", dissimilarity="absolute.value")
    
    Rd file 'HierarchicalSparseCluster.permute.Rd':
     \examples lines wider than 100 characters:
     sparsehc <- HierarchicalSparseCluster(dists=perm.out$dists, wbound=perm.out$bestw, method="complete")
    
    Rd file 'HierarchicalSparseCluster.wrapper.Rd':
     \usage lines wider than 90 characters:
     HierarchicalSparseCluster.wrapper(file, method=c("average", "complete", "single", "centroid"),
     "single","centroid"),output.cluster.files=TRUE,outputfile.prefix=NULL,maxnumgenes=5000,standardize.arrays=TRUE)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc