CRAN Package Check Results for Package sperich

Last updated on 2014-04-18 20:48:08.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.5-5 0.84 23.16 24.01 NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang 1.5-5 47.87 NOTE
r-devel-linux-x86_64-fedora-gcc 1.5-5 46.09 NOTE
r-devel-macosx-x86_64-clang 1.5-5 44.42 NOTE
r-devel-macosx-x86_64-gcc 1.5-5 ERROR
r-devel-windows-ix86+x86_64 1.5-5 2.00 34.00 36.00 NOTE
r-patched-linux-x86_64 1.5-5 0.83 23.35 24.18 NOTE
r-patched-solaris-sparc 1.5-5 280.30 NOTE
r-patched-solaris-x86 1.5-5 63.60 NOTE
r-release-linux-ix86 1.5-5 2.00 43.00 45.00 NOTE
r-release-linux-x86_64 1.5-5 0.84 23.03 23.88 NOTE
r-release-windows-ix86+x86_64 1.5-5 2.00 34.00 36.00 NOTE
r-oldrel-windows-ix86+x86_64 1.5-5 3.00 33.00 36.00 NOTE

Check Details

Version: 1.5-5
Check: dependencies in R code
Result: NOTE
    ':::' calls which should be '::':
     ‘foreach:::getDoParRegistered’ ‘foreach:::registerDoSEQ’
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macosx-x86_64-clang, r-devel-macosx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.5-5
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘index’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.5-5
Check: Rd line widths
Result: NOTE
    Rd file 'createImage.Rd':
     \examples lines wider than 100 characters:
     landwatermask.nocoast, distances=1:5, weight=0.5, dimension,
     shift, resolution=1, upperbound=3000, all.species=1:2)
    
    Rd file 'exportAsGDAL.Rd':
     \usage lines wider than 90 characters:
     exportAsGDAL(grid, shift, resolution, directory=getwd(), filename="grid.tif", drivername="GTiff")
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.5-5
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘SDMTools’
Flavor: r-devel-macosx-x86_64-gcc

Version: 1.5-5
Check: examples
Result: ERROR
    Running examples in ‘sperich-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: adjustment
    > ### Title: Adjustment of interpolated species richness
    > ### Aliases: adjustment
    >
    > ### ** Examples
    >
    > ##load data
    > data(dataset.all.species)
    > data(dataset.landwater)
    >
    > ##create grid parameters
    > dimension <- getDimension(dataset.all.species, resolution=1)
    > shift <- getShift(dataset.all.species)
    >
    > ##create landwatermask
    > landwatermask.nocoast <- createLandwatermask(dataset.landwater,
    + dimension, shift, resolution=1)
    >
    > ##estimate species richness
    > species.richness.weighted <- species.richness(dataset.all.species,
    + landwatermask.nocoast, distances=1:5, weight=0.5, dimension, shift, resolution=1,
    + upperbound=5, all.species=1:2)
    >
    > ##prepare adjustment
    > noninterpolatedgrid <- createNonInterpolatedGrid(dataset.all.species,
    + dimension, shift, resolution=1, all.species=-1)
    > clusterlimit <- 100
    >
    > clusterlist <- searchClusters(species.richness.weighted,
    + dimension, shift, resolution=1, clusterlimit)
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘SDMTools’
    Error in searchClusters(species.richness.weighted, dimension, shift, resolution = 1, :
     Package SDMTools not available!
    Execution halted
Flavor: r-devel-macosx-x86_64-gcc