CRAN Package Check Results for Package spikeslab

Last updated on 2015-08-30 09:47:43.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.5 1.30 15.96 17.27 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.5 1.67 15.48 17.15 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.5 32.63 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.5 30.65 NOTE
r-devel-osx-x86_64-clang 1.1.5 28.83 NOTE
r-devel-windows-ix86+x86_64 1.1.5 11.00 41.00 52.00 NOTE
r-patched-linux-x86_64 1.1.5 1.74 16.43 18.17 NOTE
r-patched-solaris-sparc 1.1.5 226.80 NOTE
r-patched-solaris-x86 1.1.5 46.60 NOTE
r-release-linux-x86_64 1.1.5 1.71 16.56 18.28 NOTE
r-release-osx-x86_64-mavericks 1.1.5 NOTE
r-release-windows-ix86+x86_64 1.1.5 12.00 38.00 50.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1.5 13.00 45.00 58.00 NOTE

Check Details

Version: 1.1.5
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘lars’ ‘parallel’ ‘randomForest’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.5
Check: R code for possible problems
Result: NOTE
    Cor: no visible global function definition for ‘sd’
    Cor: no visible global function definition for ‘cor’
    MSE: no visible global function definition for ‘median’
    SD: no visible global function definition for ‘sd’
    cv.spikeslab : eval.fold: no visible global function definition for
     ‘predict’
    cv.spikeslab: no visible global function definition for ‘mclapply’
    cv.spikeslab: no visible global function definition for ‘matplot’
    cv.spikeslab: no visible global function definition for ‘lines’
    cv.spikeslab: no visible global function definition for ‘sd’
    cv.spikeslab: no visible global function definition for ‘head’
    error.bars: no visible global function definition for ‘segments’
    gnet.get: no visible global function definition for ‘lars’
    gnet.get: no visible global function definition for ‘predict.lars’
    plot.spikeslab: no visible global function definition for ‘plot.lars’
    plot.spikeslab: no visible global function definition for ‘matplot’
    plot.spikeslab: no visible global function definition for ‘lines’
    predict.spikeslab: no visible global function definition for
     ‘delete.response’
    predict.spikeslab: no visible global function definition for
     ‘model.matrix’
    print.spikeslab: no visible global function definition for ‘head’
    sd.center: no visible global function definition for ‘sd’
    sparsePC.spikeslab : permute.rows: no visible global function
     definition for ‘runif’
    sparsePC.spikeslab : get.pc : <anonymous>: no visible global function
     definition for ‘randomForest’
    sparsePC.spikeslab : get.pc : <anonymous>: no visible binding for
     global variable ‘sd’
    sparsePC.spikeslab : get.pc : <anonymous>: no visible global function
     definition for ‘rnorm’
    sparsePC.spikeslab: no visible global function definition for
     ‘randomForest’
    sparsePC.spikeslab: no visible global function definition for ‘predict’
    sparsePC.spikeslab: no visible global function definition for ‘sd’
    spikeslab: no visible global function definition for ‘rnorm’
    spikeslab: no visible global function definition for ‘model.response’
    spikeslab: no visible global function definition for ‘model.matrix’
    spikeslab: no visible global function definition for ‘randomForest’
    spikeslab: no visible global function definition for ‘predict’
    spikeslab.GibbsCore : beta.update: no visible global function
     definition for ‘rnorm’
    spikeslab.GibbsCore : svd.trick: no visible global function definition
     for ‘rnorm’
    spikeslab.GibbsCore: no visible global function definition for ‘rnorm’
    spikeslab.GibbsCore: no visible global function definition for ‘rgamma’
    spikeslab.GibbsCore: no visible global function definition for ‘sd’
    spikeslab.GibbsCore: no visible global function definition for ‘rbeta’
    Undefined global functions or variables:
     cor delete.response head lars lines matplot mclapply median
     model.matrix model.response plot.lars predict predict.lars
     randomForest rbeta rgamma rnorm runif sd segments
    Consider adding
     importFrom("graphics", "lines", "matplot", "segments")
     importFrom("stats", "cor", "delete.response", "median", "model.matrix",
     "model.response", "predict", "rbeta", "rgamma", "rnorm",
     "runif", "sd")
     importFrom("utils", "head")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.1.5
Check: R code for possible problems
Result: NOTE
    cv.spikeslab: no visible global function definition for ‘mclapply’
    gnet.get: no visible global function definition for ‘lars’
    gnet.get: no visible global function definition for ‘predict.lars’
    plot.spikeslab: no visible global function definition for ‘plot.lars’
    sparsePC.spikeslab : get.pc : <anonymous>: no visible global function
     definition for ‘randomForest’
    sparsePC.spikeslab: no visible global function definition for
     ‘randomForest’
    spikeslab: no visible global function definition for ‘randomForest’
    Undefined global functions or variables:
     lars mclapply plot.lars predict.lars randomForest
Flavor: r-devel-osx-x86_64-clang

Version: 1.1.5
Check: R code for possible problems
Result: NOTE
    cv.spikeslab: no visible global function definition for ‘mclapply’
    gnet.get: no visible global function definition for ‘lars’
    gnet.get: no visible global function definition for ‘predict.lars’
    plot.spikeslab: no visible global function definition for ‘plot.lars’
    sparsePC.spikeslab : get.pc : <anonymous>: no visible global function
     definition for ‘randomForest’
    sparsePC.spikeslab: no visible global function definition for
     ‘randomForest’
    spikeslab: no visible global function definition for ‘randomForest’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64