CRAN Package Check Results for Package stashR

Last updated on 2016-12-04 23:48:20.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3-5 0.94 16.11 17.05 ERROR
r-devel-linux-x86_64-debian-gcc 0.3-5 0.92 15.86 16.77 ERROR
r-devel-linux-x86_64-fedora-clang 0.3-5 31.80 ERROR --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 0.3-5 29.57 ERROR --no-stop-on-test-error
r-devel-macos-x86_64-clang 0.3-5 27.21 ERROR
r-devel-windows-ix86+x86_64 0.3-5 3.00 46.00 49.00 ERROR
r-patched-linux-x86_64 0.3-5 0.76 13.88 14.63 ERROR
r-patched-solaris-sparc 0.3-5 139.00 ERROR
r-patched-solaris-x86 0.3-5 37.80 ERROR
r-release-linux-x86_64 0.3-5 0.90 13.89 14.78 ERROR
r-release-osx-x86_64-mavericks 0.3-5 NOTE
r-release-windows-ix86+x86_64 0.3-5 6.00 32.00 38.00 ERROR
r-oldrel-windows-ix86+x86_64 0.3-5 4.00 31.00 35.00 ERROR

Check Details

Version: 0.3-5
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3-5
Check: whether the namespace can be loaded with stated dependencies
Result: NOTE
    Warning: no function found corresponding to methods exports from ‘stashR’ for: ‘initialize’
    
    A namespace must be able to be loaded with just the base namespace
    loaded: otherwise if the namespace gets loaded by a saved object, the
    session will be unable to start.
    
    Probably some imports need to be declared in the NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.3-5
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3-5
Check: R code for possible problems
Result: NOTE
    cacheVersionFile: no visible global function definition for
     ‘download.file’
    getdata: no visible global function definition for ‘download.file’
    copyDB,localDB: no visible global function definition for ‘new’
    initialize,localDB: no visible global function definition for
     ‘callNextMethod’
    initialize,remoteDB: no visible global function definition for
     ‘callNextMethod’
    Undefined global functions or variables:
     callNextMethod download.file new
    Consider adding
     importFrom("methods", "callNextMethod", "new")
     importFrom("utils", "download.file")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.3-5
Check: tests
Result: ERROR
    Running the tests in ‘tests/tests.R’ failed.
    Last 13 lines of output:
     > ## Test objects of class 'remoteDB'
     > ## These tests will fail (within a 'try()') if Internet connectivity
     > ## is not available
     >
     > myurl <- "http://www.biostat.jhsph.edu/MCAPS/data_v0.3/"
     >
     > ## create a 'remoteDB' object ##
     > db <- new("remoteDB", url= myurl, dir = dir, name= "MCAPS")
     Error in download.file(rpath, versionFile(db, where = "local"), mode = "w", :
     cannot open URL 'http://www.biostat.jhsph.edu/MCAPS/data_v0.3/version'
     Calls: new ... initialize -> initialize -> cacheVersionFile -> download.file
     In addition: Warning message:
     In download.file(rpath, versionFile(db, where = "local"), mode = "w", :
     cannot open URL 'http://www.biostat.jhsph.edu/MCAPS/data_v0.3/version': HTTP status was '404 Not Found'
     Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 0.3-5
Flags: --no-stop-on-test-error
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3-5
Flags: --no-stop-on-test-error
Check: whether the namespace can be loaded with stated dependencies
Result: NOTE
    Warning: no function found corresponding to methods exports from ‘stashR’ for: ‘initialize’
    
    A namespace must be able to be loaded with just the base namespace
    loaded: otherwise if the namespace gets loaded by a saved object, the
    session will be unable to start.
    
    Probably some imports need to be declared in the NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3-5
Flags: --no-stop-on-test-error
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3-5
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    cacheVersionFile: no visible global function definition for
     ‘download.file’
    getdata: no visible global function definition for ‘download.file’
    copyDB,localDB: no visible global function definition for ‘new’
    initialize,localDB: no visible global function definition for
     ‘callNextMethod’
    initialize,remoteDB: no visible global function definition for
     ‘callNextMethod’
    Undefined global functions or variables:
     callNextMethod download.file new
    Consider adding
     importFrom("methods", "callNextMethod", "new")
     importFrom("utils", "download.file")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3-5
Flags: --no-stop-on-test-error
Check: tests
Result: ERROR
    Running the tests in ‘tests/tests.R’ failed.
    Last 13 lines of output:
     > ## Test objects of class 'remoteDB'
     > ## These tests will fail (within a 'try()') if Internet connectivity
     > ## is not available
     >
     > myurl <- "http://www.biostat.jhsph.edu/MCAPS/data_v0.3/"
     >
     > ## create a 'remoteDB' object ##
     > db <- new("remoteDB", url= myurl, dir = dir, name= "MCAPS")
     Error in download.file(rpath, versionFile(db, where = "local"), mode = "w", :
     cannot open URL 'http://www.biostat.jhsph.edu/MCAPS/data_v0.3/version'
     Calls: new ... initialize -> initialize -> cacheVersionFile -> download.file
     In addition: Warning message:
     In download.file(rpath, versionFile(db, where = "local"), mode = "w", :
     cannot open URL 'http://www.biostat.jhsph.edu/MCAPS/data_v0.3/version': HTTP status was '404 Not Found'
     Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3-5
Check: tests
Result: ERROR
    Running the tests in ‘tests/tests.R’ failed.
    Last 13 lines of output:
     > ## is not available
     >
     > myurl <- "http://www.biostat.jhsph.edu/MCAPS/data_v0.3/"
     >
     > ## create a 'remoteDB' object ##
     > db <- new("remoteDB", url= myurl, dir = dir, name= "MCAPS")
     Error in download.file(rpath, versionFile(db, where = "local"), mode = "w", :
     cannot open URL 'http://www.biostat.jhsph.edu/MCAPS/data_v0.3/version'
     Calls: new ... initialize -> initialize -> cacheVersionFile -> download.file
     In addition: Warning message:
     In download.file(rpath, versionFile(db, where = "local"), mode = "w", :
     cannot open URL 'http://www.biostat.jhsph.edu/MCAPS/data_v0.3/version': HTTP status was '404 Not Found'
     Execution halted
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64