CRAN Package Check Results for Package survMisc

Last updated on 2015-08-01 19:48:36.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.6 2.98 45.51 48.49 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.6 3.01 43.86 46.87 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.6 96.44 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.6 90.53 NOTE
r-devel-osx-x86_64-clang 0.4.6 78.45 OK
r-devel-windows-ix86+x86_64 0.4.6 23.00 109.00 132.00 NOTE
r-patched-linux-x86_64 0.4.6 2.89 44.18 47.07 OK
r-patched-solaris-sparc 0.4.6 570.40 OK
r-patched-solaris-x86 0.4.6 120.00 OK
r-release-linux-x86_64 0.4.6 2.87 47.75 50.62 OK
r-release-osx-x86_64-mavericks 0.4.6 OK
r-release-windows-ix86+x86_64 0.4.6 23.00 103.00 126.00 OK
r-oldrel-windows-ix86+x86_64 0.4.6 31.00 189.00 220.00 OK

Check Details

Version: 0.4.6
Check: R code for possible problems
Result: NOTE
    .allCombo : <anonymous>: no visible global function definition for
     ‘combn’
    .getLR: no visible global function definition for ‘model.response’
    .getLR: no visible binding for global variable ‘df’
    .getScore: no visible global function definition for ‘model.response’
    .getScore: no visible binding for global variable ‘df’
    .getTne: no visible global function definition for ‘model.response’
    .getWald: no visible binding for global variable ‘df’
    autoplot.rpart: no visible global function definition for ‘stack’
    autoplot.rpart: no visible global function definition for
     ‘complete.cases’
    autoplot.survfit: no visible global function definition for ‘runif’
    autoplot.survfit: no visible binding for global variable ‘time’
    ci.survfit: no visible binding for global variable ‘data’
    cutp.coxph: no visible global function definition for ‘model.frame’
    cutp.coxph : <anonymous>: no visible global function definition for
     ‘tail’
    cutp.coxph: no visible global function definition for ‘lines’
    dx.coxph: no visible global function definition for ‘model.frame’
    dx.coxph: no visible global function definition for ‘dev.new’
    dx.coxph: no visible global function definition for ‘plot’
    dx.coxph: no visible global function definition for ‘predict’
    dx.coxph: no visible global function definition for ‘rexp’
    dx.coxph: no visible binding for global variable ‘qexp’
    dx.coxph: no visible global function definition for ‘abline’
    dx.coxph: no visible global function definition for ‘rainbow’
    dx.coxph: no visible global function definition for ‘matplot’
    dx.coxph: no visible global function definition for ‘is.empty.model’
    dx.coxph: no visible global function definition for ‘model.matrix’
    dx.coxph: no visible binding for global variable ‘contrasts’
    dx.coxph: no visible global function definition for ‘terms’
    dx.coxph: no visible global function definition for ‘anova’
    dx.coxph: no visible global function definition for ‘preplot’
    dx.coxph: no visible global function definition for ‘residuals’
    dx.coxph: no visible global function definition for ‘dev.off’
    gamTerms: no visible global function definition for ‘delete.response’
    gamTerms: no visible global function definition for ‘terms’
    gamTerms: no visible global function definition for ‘formula’
    gamTerms: no visible global function definition for ‘predict’
    gamTerms: no visible global function definition for ‘as.formula’
    genSurvDf: no visible global function definition for ‘as.formula’
    genSurvDt: no visible global function definition for ‘as.formula’
    gof.coxph: no visible global function definition for ‘predict’
    gof.coxph: no visible global function definition for ‘model.frame’
    gof.coxph: no visible global function definition for ‘residuals’
    gof.coxph: no visible global function definition for ‘pnorm’
    gof.coxph: no visible global function definition for ‘as.formula’
    gof.coxph: no visible global function definition for ‘anova’
    locLR.coxph: no visible global function definition for ‘is.empty.model’
    locLR.coxph: no visible global function definition for ‘model.matrix’
    locLR.coxph: no visible binding for global variable ‘contrasts’
    locScore.coxph: no visible global function definition for
     ‘is.empty.model’
    locScore.coxph: no visible global function definition for
     ‘model.matrix’
    locScore.coxph: no visible binding for global variable ‘contrasts’
    multi.coxph: no visible global function definition for ‘model.response’
    multi.coxph: no visible global function definition for ‘formula’
    multi.coxph: no visible global function definition for ‘as.formula’
    multi.coxph: no visible global function definition for ‘is.empty.model’
    multi.coxph: no visible global function definition for ‘model.matrix’
    multi.coxph: no visible binding for global variable ‘contrasts’
    multi.coxph: no visible global function definition for ‘na.omit’
    multi.coxph: no visible global function definition for ‘object.size’
    plot.multi.coxph : .plotIC: no visible global function definition for
     ‘plot’
    plot.multi.coxph : .plotIC: no visible global function definition for
     ‘abline’
    plot.multi.coxph : .plotIC: no visible global function definition for
     ‘title’
    plot.multi.coxph : .plotREW: no visible global function definition for
     ‘plot’
    plot.multi.coxph : .plotREW: no visible global function definition for
     ‘abline’
    plot.multi.coxph : .plotREW: no visible global function definition for
     ‘title’
    plot.multi.coxph : .plotSumREWs: no visible global function definition
     for ‘barplot’
    plot.multi.coxph : .plotSumREWs: no visible global function definition
     for ‘title’
    plotTerm: no visible global function definition for ‘qnorm’
    profLik: no visible global function definition for ‘model.frame’
    profLik: no visible global function definition for ‘dev.new’
    sig.coxph: no visible global function definition for ‘coefficients’
    sig.coxph: no visible global function definition for ‘pchisq’
    sig.coxph: no visible global function definition for ‘coef’
    sig.coxph: no visible global function definition for ‘model.matrix’
    sig.coxph: no visible global function definition for ‘model.response’
    sig.coxph: no visible global function definition for ‘model.frame’
    sig.coxph: no visible global function definition for ‘update’
    tableRhs: no visible global function definition for ‘model.matrix’
    tableRhs: no visible binding for global variable ‘contrasts’
    tne.Surv: no visible binding for global variable ‘time’
    tne.coxph: no visible global function definition for ‘is.empty.model’
    tne.coxph: no visible global function definition for ‘model.matrix’
    tne.coxph: no visible binding for global variable ‘contrasts’
    tne.formula: no visible global function definition for ‘is.empty.model’
    tne.formula: no visible global function definition for ‘model.matrix’
    tne.formula: no visible binding for global variable ‘contrasts’
    tne.survfit: no visible global function definition for ‘is.empty.model’
    Undefined global functions or variables:
     abline anova as.formula barplot coef coefficients combn
     complete.cases contrasts data delete.response dev.new dev.off df
     formula is.empty.model lines matplot model.frame model.matrix
     model.response na.omit object.size pchisq plot pnorm predict preplot
     qexp qnorm rainbow residuals rexp runif stack tail terms time title
     update
    Consider adding
     importFrom("grDevices", "dev.new", "dev.off", "rainbow")
     importFrom("graphics", "abline", "barplot", "lines", "matplot", "plot",
     "title")
     importFrom("stats", "anova", "as.formula", "coef", "coefficients",
     "complete.cases", "contrasts", "delete.response", "df",
     "formula", "is.empty.model", "model.frame", "model.matrix",
     "model.response", "na.omit", "pchisq", "pnorm", "predict",
     "preplot", "qexp", "qnorm", "residuals", "rexp", "runif",
     "terms", "time", "update")
     importFrom("utils", "combn", "data", "object.size", "stack", "tail")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64