CRAN Package Check Results for Package surveillance

Last updated on 2014-12-22 09:54:28.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.8-2 14.45 215.51 229.96 NOTE
r-devel-linux-x86_64-debian-gcc 1.8-2 14.81 220.15 234.96 NOTE
r-devel-linux-x86_64-fedora-clang 1.8-2 505.07 NOTE
r-devel-linux-x86_64-fedora-gcc 1.8-2 480.11 NOTE
r-devel-osx-x86_64-clang 1.8-2 421.89 NOTE
r-devel-windows-ix86+x86_64 1.8-1 54.00 635.00 689.00 WARN
r-patched-linux-x86_64 1.8-1 16.61 227.85 244.46 NOTE
r-patched-solaris-sparc 1.8-2 2817.50 NOTE
r-patched-solaris-x86 1.8-2 521.90 NOTE
r-release-linux-ix86 1.8-1 19.28 264.97 284.24 NOTE
r-release-linux-x86_64 1.8-1 16.88 227.29 244.17 NOTE
r-release-osx-x86_64-mavericks 1.8-2 NOTE
r-release-osx-x86_64-snowleopard 1.8-2 NOTE
r-release-windows-ix86+x86_64 1.8-2 46.00 697.00 743.00 NOTE
r-oldrel-windows-ix86+x86_64 1.8-2 44.00 692.00 736.00 WARN

Memtest notes: valgrind

Check Details

Version: 1.8-2
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘INLA’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8-1
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'gpclib' 'INLA'
Flavor: r-devel-windows-ix86+x86_64

Version: 1.8-1
Check: installed package size
Result: NOTE
     installed size is 5.6Mb
     sub-directories of 1Mb or more:
     doc 1.2Mb
     libs 1.4Mb
Flavors: r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.8-1
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: 'gpclib'
Flavor: r-devel-windows-ix86+x86_64

Version: 1.8-1
Check: for code/documentation mismatches
Result: WARN
    Codoc mismatches from documentation object 'hhh4':
    hhh4
     Code: function(stsObj, control = pairlist(ar = list(f = ~-1, offset =
     1, lag = 1, weights = NULL, initial = NULL), ne =
     list(f = ~-1, offset = 1, lag = 1, weights =
     neighbourhood(stsObj) == 1, initial = NULL), end =
     list(f = ~1, offset = 1, initial = NULL), family =
     c("Poisson", "NegBin1", "NegBinM"), subset =
     2:nrow(stsObj), optimizer = list(stop = list(tol =
     1e-05, niter = 100), regression = list(method =
     "nlminb"), variance = list(method = "nlminb")),
     verbose = FALSE, start = list(fixed = NULL, random =
     NULL, sd.corr = NULL), data = list(t = epoch(stsObj) -
     1), keep.terms = FALSE), check.analyticals = FALSE)
     Docs: function(stsObj, control = list(ar = list(f = ~-1, offset = 1,
     lag = 1, weights = NULL, initial = NULL), ne = list(f
     = ~-1, offset = 1, lag = 1, weights =
     neighbourhood(stsObj) == 1, initial = NULL), end =
     list(f = ~1, offset = 1, initial = NULL), family =
     c("Poisson", "NegBin1", "NegBinM"), subset =
     2:nrow(stsObj), optimizer = list(stop = list(tol =
     1e-05, niter = 100), regression = list(method =
     "nlminb"), variance = list(method = "nlminb")),
     verbose = FALSE, start = list(fixed = NULL, random =
     NULL, sd.corr = NULL), data = list(t = epoch(stsObj) -
     1), keep.terms = FALSE), check.analyticals = FALSE)
     Mismatches in argument default values:
     Name: 'control'
     Code: pairlist(ar = list(f = ~-1, offset = 1, lag = 1, weights = NULL,
     initial = NULL), ne = list(f = ~-1, offset = 1, lag = 1,
     weights = neighbourhood(stsObj) == 1, initial = NULL), end = list(f = ~1,
     offset = 1, initial = NULL), family = c("Poisson", "NegBin1",
     "NegBinM"), subset = 2:nrow(stsObj), optimizer = list(stop = list(tol = 1e-05,
     niter = 100), regression = list(method = "nlminb"), variance = list(method = "nlminb")), verbose = FALSE, start = list(fixed = NULL,
     random = NULL, sd.corr = NULL), data = list(t = epoch(stsObj) -
     1), keep.terms = FALSE)
     Docs: list(ar = list(f = ~-1, offset = 1, lag = 1, weights = NULL,
     initial = NULL), ne = list(f = ~-1, offset = 1, lag = 1,
     weights = neighbourhood(stsObj) == 1, initial = NULL), end = list(f = ~1,
     offset = 1, initial = NULL), family = c("Poisson", "NegBin1",
     "NegBinM"), subset = 2:nrow(stsObj), optimizer = list(stop = list(tol = 1e-05,
     niter = 100), regression = list(method = "nlminb"), variance = list(method = "nlminb")),
     verbose = FALSE, start = list(fixed = NULL, random = NULL,
     sd.corr = NULL), data = list(t = epoch(stsObj) - 1),
     keep.terms = FALSE)
Flavor: r-devel-windows-ix86+x86_64

Version: 1.8-1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘INLA’
Flavors: r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 1.8-2
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘rgeos’ ‘INLA’
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8-2
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘rgeos’
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8-2
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: sp
    Loading required package: xtable
    Loading required package: polyCub
    This is surveillance 1.8.2. For overview type ‘help(surveillance)’.
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'glrnb.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `relsize.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    /vign_test/surveillance/vignettes/glrnb.tex:24: ==> Fatal error occurred, no o
    utput PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8-2
Check: installed package size
Result: NOTE
     installed size is 5.1Mb
     sub-directories of 1Mb or more:
     libs 1.4Mb
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8-2
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: D:/temp/RtmpwZ5YXM/R.INSTALL2f5456d5233f/surveillance/man/marks.Rd: docType 'import' is unrecognized
     Warning: D:/temp/RtmpwZ5YXM/R.INSTALL2f5456d5233f/surveillance/man/multiplicity.Rd: docType 'import' is unrecognized
Flavor: r-oldrel-windows-ix86+x86_64

Version: 1.8-2
Check: Rd files
Result: WARN
    prepare_Rd: marks.Rd: docType 'import' is unrecognized
    prepare_Rd: multiplicity.Rd: docType 'import' is unrecognized
Flavor: r-oldrel-windows-ix86+x86_64