CRAN Package Check Results for Package surveillance

Last updated on 2014-08-23 10:48:14.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.8-0 15.54 210.67 226.21 NOTE
r-devel-linux-x86_64-debian-gcc 1.8-0 17.20 211.36 228.56 NOTE
r-devel-linux-x86_64-fedora-clang 1.8-0 518.37 NOTE
r-devel-linux-x86_64-fedora-gcc 1.8-0 495.16 NOTE
r-devel-osx-x86_64-clang 1.8-0 392.36 NOTE
r-devel-windows-ix86+x86_64 1.8-0 51.00 450.00 501.00 NOTE
r-patched-linux-x86_64 1.8-0 17.14 219.48 236.61 NOTE
r-patched-solaris-sparc 1.8-0 2803.30 NOTE
r-patched-solaris-x86 1.8-0 579.40 NOTE
r-release-linux-ix86 1.8-0 21.32 271.28 292.59 NOTE
r-release-linux-x86_64 1.8-0 18.08 236.64 254.72 NOTE
r-release-osx-x86_64-snowleopard 1.7-0 WARN
r-release-windows-ix86+x86_64 1.8-0 45.00 486.00 531.00 NOTE
r-oldrel-windows-ix86+x86_64 1.8-0 50.00 495.00 545.00 NOTE

Memtest notes: valgrind

Check Details

Version: 1.8-0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘INLA’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8-0
Check: R code for possible problems
Result: NOTE
    algo.hmm: no visible global function definition for ‘viterbi.msm’
    boda: no visible global function definition for ‘detectCores’
    boda: no visible global function definition for ‘inla.setOption’
    bodaFit: no visible global function definition for ‘inla’
    bodaFit: no visible global function definition for ‘inla.tmarginal’
    bodaFit: no visible global function definition for ‘inla.rmarginal’
    glm_epidataCS: no visible binding for global variable ‘area’
    nowcast: no visible global function definition for ‘run.jags’
    nowcast: no visible global function definition for ‘as.mcmc.list’
    siaf.powerlaw : F: no visible global function definition for
     ‘.polyCub.iso’
    siaf.powerlaw : Deriv: no visible global function definition for
     ‘.polyCub.iso’
    siaf.powerlawL : F: no visible global function definition for
     ‘.polyCub.iso’
    siaf.powerlawL : Deriv: no visible global function definition for
     ‘.polyCub.iso’
    siaf.student : F: no visible global function definition for
     ‘.polyCub.iso’
    siaf.student : Deriv: no visible global function definition for
     ‘.polyCub.iso’
    xtable.summary.twinstim: no visible global function definition for
     ‘caption<-’
    xtable.summary.twinstim: no visible global function definition for
     ‘label<-’
    xtable.summary.twinstim: no visible global function definition for
     ‘align<-’
    xtable.summary.twinstim: no visible global function definition for
     ‘digits<-’
    xtable.summary.twinstim: no visible global function definition for
     ‘display<-’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.8-0
Check: installed package size
Result: NOTE
     installed size is 5.1Mb
     sub-directories of 1Mb or more:
     data 1.1Mb
     doc 1.2Mb
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8-0
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'gpclib' 'INLA'
Flavor: r-devel-windows-ix86+x86_64

Version: 1.8-0
Check: R code for possible problems
Result: NOTE
    boda: no visible global function definition for 'inla.setOption'
    bodaFit: no visible global function definition for 'inla'
    bodaFit: no visible global function definition for 'inla.tmarginal'
    bodaFit: no visible global function definition for 'inla.rmarginal'
Flavors: r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8-0
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: 'gpclib'
Flavor: r-devel-windows-ix86+x86_64

Version: 1.7-0
Check: installed package size
Result: NOTE
     installed size is 5.1Mb
     sub-directories of 1Mb or more:
     doc 1.2Mb
     libs 1.2Mb
Flavor: r-release-osx-x86_64-snowleopard

Version: 1.7-0
Check: examples
Result: WARN
    checking a package with encoding 'latin1' in an ASCII locale
    
     OK
Flavor: r-release-osx-x86_64-snowleopard

Version: 1.7-0
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: Rcpp
    Loading required package: sp
    Loading required package: xtable
    Loading required package: polyCub
    This is surveillance 1.7.0. For overview type 'help(surveillance)'.
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'glrnb.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `pdftricks.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-snowleopard