CRAN Package Check Results for Package swamp

Last updated on 2014-09-16 23:47:49.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.3 0.87 26.45 27.32 NOTE
r-devel-linux-x86_64-debian-gcc 1.2.3 0.85 25.07 25.92 NOTE
r-devel-linux-x86_64-fedora-clang 1.2.3 54.47 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2.3 51.35 NOTE
r-devel-osx-x86_64-clang 1.2.3 49.07 NOTE
r-devel-windows-ix86+x86_64 1.2.3 5.00 45.00 50.00 NOTE
r-patched-linux-x86_64 1.2.3 1.34 26.03 27.37 NOTE
r-patched-solaris-sparc 1.2.3 330.10 NOTE
r-patched-solaris-x86 1.2.3 67.90 NOTE
r-release-linux-ix86 1.2.3 1.35 34.81 36.16 NOTE
r-release-linux-x86_64 1.2.3 0.94 26.72 27.66 NOTE
r-release-osx-x86_64-mavericks 1.2.3 NOTE
r-release-osx-x86_64-snowleopard 1.2.3 NOTE
r-release-windows-ix86+x86_64 1.2.3 6.00 46.00 52.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2.3 5.00 47.00 52.00 NOTE

Check Details

Version: 1.2.3
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘MASS’ ‘amap’ ‘gplots’ ‘impute’
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘MASS’ ‘amap’ ‘gplots’ ‘impute’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2.3
Check: R code for possible problems
Result: NOTE
    adjust.linearmodel: no visible global function definition for ‘rlm’
    confounding: no visible global function definition for ‘heatmap.2’
    hca.plot: no visible global function definition for ‘colorpanel’
    hca.plot: no visible global function definition for ‘hcluster’
    hca.test: no visible global function definition for ‘hcluster’
    kill.pc: no visible global function definition for ‘impute.knn’
    prince: no visible global function definition for ‘impute.knn’
    prince.plot: no visible global function definition for ‘heatmap.2’
    prince.var.plot: no visible global function definition for ‘impute.knn’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.2.3
Check: Rd line widths
Result: NOTE
    Rd file 'prince.plot.Rd':
     \examples lines wider than 100 characters:
     ## patient annotations as a data.frame, annotations should be numbers and factors but not characters.
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-linux-x86_64