CRAN Package Check Results for Package taxize

Last updated on 2015-08-04 21:47:23.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.6.0 3.49 45.37 48.86 NOTE
r-devel-linux-x86_64-debian-gcc 0.6.0 3.36 44.27 47.64 NOTE
r-devel-linux-x86_64-fedora-clang 0.6.0 95.62 NOTE
r-devel-linux-x86_64-fedora-gcc 0.6.0 89.26 NOTE
r-devel-osx-x86_64-clang 0.6.0 84.80 OK
r-devel-windows-ix86+x86_64 0.6.0 22.00 81.00 103.00 NOTE
r-patched-linux-x86_64 0.6.0 3.37 43.14 46.51 OK
r-patched-solaris-sparc 0.6.0 592.40 OK
r-patched-solaris-x86 0.6.0 128.20 OK
r-release-linux-x86_64 0.6.0 3.34 45.67 49.00 OK
r-release-osx-x86_64-mavericks 0.6.0 OK
r-release-windows-ix86+x86_64 0.6.0 21.00 82.00 103.00 OK
r-oldrel-windows-ix86+x86_64 0.6.0 20.00 101.00 121.00 OK

Check Details

Version: 0.6.0
Check: R code for possible problems
Result: NOTE
    apgFamilies : <anonymous>: no visible global function definition for
     ‘setNames’
    apgOrders : <anonymous>: no visible global function definition for
     ‘setNames’
    cbind.classification : gethiernames: no visible global function
     definition for ‘setNames’
    cbind.classification_ids : gethiernames: no visible global function
     definition for ‘setNames’
    check_ubioid: no visible global function definition for ‘is’
    children.default: no visible global function definition for ‘setNames’
    class2tree: no visible global function definition for ‘is’
    class2tree: no visible global function definition for ‘hclust’
    classification.default: no visible global function definition for
     ‘setNames’
    classification.gbifid : fun: no visible global function definition for
     ‘is’
    classification.nbnid : fun: no visible global function definition for
     ‘is’
    colClasses : <anonymous>: no visible global function definition for
     ‘as’
    col_downstream: no visible global function definition for ‘setNames’
    col_downstream : <anonymous>: no visible global function definition for
     ‘na.omit’
    col_search: no visible global function definition for ‘setNames’
    data_citations: no visible global function definition for ‘citation’
    do_itis: no visible global function definition for ‘setNames’
    do_ncbi: no visible global function definition for ‘setNames’
    downstream.default: no visible global function definition for
     ‘setNames’
    eol_search: no visible global function definition for ‘setNames’
    get_boldid_: no visible global function definition for ‘setNames’
    get_colid : fun: no visible global function definition for ‘setNames’
    get_colid_: no visible global function definition for ‘setNames’
    get_eolid_: no visible global function definition for ‘setNames’
    get_gbifid_: no visible global function definition for ‘setNames’
    get_ids_ : foo: no visible global function definition for ‘setNames’
    get_ids_: no visible global function definition for ‘setNames’
    get_nbnid_: no visible global function definition for ‘setNames’
    get_tpsid_: no visible global function definition for ‘setNames’
    get_tsn: no visible global function definition for ‘na.omit’
    get_tsn_: no visible global function definition for ‘setNames’
    get_tsn_help: no visible global function definition for ‘is’
    get_ubioid : fun: no visible global function definition for ‘is’
    get_ubioid : fun: no visible global function definition for ‘na.omit’
    get_ubioid_: no visible global function definition for ‘setNames’
    get_ubioid_help: no visible global function definition for ‘is’
    get_uid_: no visible global function definition for ‘setNames’
    getcsv: no visible global function definition for ‘download.file’
    getexpertsfromtsn: no visible global function definition for ‘setNames’
    getfullrecordfromlsid: no visible global function definition for
     ‘setNames’
    getfullrecordfromtsn: no visible global function definition for
     ‘setNames’
    getjurisdictionaloriginfromtsn: no visible global function definition
     for ‘setNames’
    getothersourcesfromtsn: no visible global function definition for
     ‘setNames’
    gnr_resolve: no visible global function definition for ‘write.table’
    ipni_ping: no visible global function definition for ‘read.delim’
    ipni_search: no visible global function definition for ‘read.delim’
    itis_acceptname: no visible global function definition for ‘setNames’
    itis_downstream: no visible global function definition for ‘setNames’
    itis_foo: no visible global function definition for ‘is’
    itis_parse: no visible global function definition for ‘setNames’
    itis_terms: no visible global function definition for ‘setNames’
    itisdf: no visible global function definition for ‘setNames’
    match_code: no visible global function definition for ‘is’
    match_status: no visible global function definition for ‘is’
    parse_full : <anonymous>: no visible global function definition for
     ‘setNames’
    parse_ncbi : <anonymous>: no visible global function definition for
     ‘setNames’
    plantminer: no visible global function definition for ‘URLencode’
    plot.classtree: no visible global function definition for ‘is’
    plot.classtree: no visible global function definition for ‘plot’
    print.classtree: no visible global function definition for ‘is’
    process_ids: no visible global function definition for ‘is’
    synonyms.colid: no visible global function definition for ‘setNames’
    synonyms.default: no visible global function definition for ‘setNames’
    synonyms.nbnid: no visible global function definition for ‘setNames’
    synonyms.tpsid: no visible global function definition for ‘setNames’
    synonyms.tsn : fun: no visible global function definition for ‘is’
    synonyms.tsn : fun: no visible global function definition for
     ‘setNames’
    synonyms.tsn: no visible global function definition for ‘setNames’
    synonyms.ubioid: no visible global function definition for ‘setNames’
    tax_name : fun: no visible global function definition for ‘setNames’
    taxa2dist: no visible global function definition for ‘as.dist’
    tnrs : mainfunc: no visible global function definition for
     ‘write.table’
    tp_search: no visible global function definition for ‘setNames’
    tp_summary: no visible global function definition for ‘setNames’
    ubio_id : <anonymous>: no visible global function definition for ‘is’
    upstream.default: no visible global function definition for ‘setNames’
    upstream.tsn : fun: no visible global function definition for
     ‘setNames’
    Undefined global functions or variables:
     URLencode as as.dist citation download.file hclust is na.omit plot
     read.delim setNames write.table
    Consider adding
     importFrom("graphics", "plot")
     importFrom("methods", "as", "is")
     importFrom("stats", "as.dist", "hclust", "na.omit", "setNames")
     importFrom("utils", "URLencode", "citation", "download.file",
     "read.delim", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64