CRAN Package Check Results for Package uniCox

Last updated on 2015-09-04 06:48:28.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 0.96 53.28 54.24 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 0.79 54.04 54.83 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 103.63 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 102.50 NOTE
r-devel-osx-x86_64-clang 1.0 60.82 NOTE
r-devel-windows-ix86+x86_64 1.0 5.00 250.00 255.00 NOTE
r-patched-linux-x86_64 1.0 0.90 54.53 55.44 NOTE
r-patched-solaris-sparc 1.0 741.40 NOTE
r-patched-solaris-x86 1.0 138.70 NOTE
r-release-linux-x86_64 1.0 0.88 54.48 55.36 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 10.00 241.00 251.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 6.00 229.00 235.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     predict.uniCox print.uniCoxCVFit print.uniCoxFit
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    permute.rows: no visible global function definition for ‘runif’
    uniCox: no visible global function definition for ‘quantile’
    uniCoxCV: no visible global function definition for ‘quantile’
    uniCoxCV: no visible global function definition for ‘coxph’
    uniCoxCV: no visible binding for global variable ‘var’
    Undefined global functions or variables:
     coxph quantile runif var
    Consider adding
     importFrom("stats", "quantile", "runif", "var")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.0
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'predict.uniCox':
     ‘predict.uniCox’
    
    S3 methods shown with full name in documentation object 'uniCox-internal':
     ‘print.uniCoxCVFit’ ‘print.uniCoxFit’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    uniCoxCV: no visible global function definition for ‘coxph’
    Undefined global functions or variables:
     coxph
Flavor: r-devel-osx-x86_64-clang

Version: 1.0
Check: R code for possible problems
Result: NOTE
    uniCoxCV: no visible global function definition for ‘coxph’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64