CRAN Package Check Results for Package vegan

Last updated on 2014-08-02 03:51:03.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.0-10 5.97 130.21 136.18 NOTE
r-devel-linux-x86_64-debian-gcc 2.0-10 6.09 125.34 131.43 NOTE
r-devel-linux-x86_64-fedora-clang 2.0-10 289.25 NOTE
r-devel-linux-x86_64-fedora-gcc 2.0-10 267.18 OK
r-devel-osx-x86_64-clang 2.0-10 227.55 NOTE
r-devel-windows-ix86+x86_64 2.0-10 23.00 234.00 257.00 OK
r-patched-linux-x86_64 2.0-10 6.60 126.60 133.20 NOTE
r-patched-solaris-sparc 2.0-10 1409.90 OK --no-build-vignettes
r-patched-solaris-x86 2.0-10 333.40 OK
r-release-linux-ix86 2.0-10 8.20 156.20 164.41 NOTE
r-release-linux-x86_64 2.0-10 6.28 125.74 132.02 NOTE
r-release-osx-x86_64-mavericks 2.0-10 NOTE
r-release-osx-x86_64-snowleopard 2.0-10 NOTE
r-release-windows-ix86+x86_64 2.0-10 35.00 304.00 339.00 OK
r-oldrel-windows-ix86+x86_64 2.0-10 33.00 312.00 345.00 OK

Check Details

Version: 2.0-10
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File vegan/R/orditkplot.R :
     assign(dumpName, xy, envir = .GlobalEnv)
     assign(dumpName, xy, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 2.0-10
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: maptools
Flavor: r-release-osx-x86_64-mavericks

Version: 2.0-10
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    (/usr/local/texlive/2013basic/texmf-dist/tex/latex/amsfonts/amssymb.sty
    (/usr/local/texlive/2013basic/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
    
    ! LaTeX Error: File `ucs.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    Enter file name:
    /Builds/CRAN-QA-Simon/packages/mavericks-x86_64/results/3.1/vegan.Rcheck/vign_t
    est/vegan/vignettes/vegan.sty:11: Emergency stop.
    <read *>
    
    l.11 \usepackage
     [utf8x]{inputenc}^^M
    /Builds/CRAN-QA-Simon/packages/mavericks-x86_64/results/3.1/vegan.Rcheck/vign_t
    est/vegan/vignettes/vegan.sty:11: ==> Fatal error occurred, no output PDF file
     produced!
    Transcript written on decision-vegan.log.
    /usr/bin/texi2dvi: pdflatex exited with bad status, quitting.
    /usr/bin/texi2dvi: see decision-vegan.log for errors.
    make: *** [decision-vegan.pdf] Error 1
    Error in buildVignettes(dir = "/Builds/CRAN-QA-Simon/packages/mavericks-x86_64/results/3.1/vegan.Rcheck/vign_test/vegan") :
     running 'make' failed
    Execution halted
Flavor: r-release-osx-x86_64-mavericks

Version: 2.0-10
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: 'smacof'
Flavor: r-release-osx-x86_64-snowleopard

Version: 2.0-10
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    (/usr/local/texlive/2012basic/texmf-dist/tex/latex/amsfonts/amssymb.sty
    (/usr/local/texlive/2012basic/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
    
    ! LaTeX Error: File `ucs.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    Enter file name:
    /Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/
    vegan.Rcheck/vign_test/vegan/vignettes/vegan.sty:11: Emergency stop.
    <read *>
    
    l.11 \usepackage
     [utf8x]{inputenc}^^M
    /Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/
    vegan.Rcheck/vign_test/vegan/vignettes/vegan.sty:11: ==> Fatal error occurred,
     no output PDF file produced!
    Transcript written on decision-vegan.log.
    /usr/bin/texi2dvi: pdflatex exited with bad status, quitting.
    /usr/bin/texi2dvi: see decision-vegan.log for errors.
    make: *** [decision-vegan.pdf] Error 1
    Error in buildVignettes(dir = "/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/vegan.Rcheck/vign_test/vegan") :
     running 'make' failed
    Execution halted
Flavor: r-release-osx-x86_64-snowleopard