CRAN Package Check Results for Package vegan

Last updated on 2014-04-19 08:50:23.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.0-10 6.08 130.03 136.10 NOTE
r-devel-linux-x86_64-debian-gcc 2.0-10 6.38 132.14 138.53 NOTE
r-devel-linux-x86_64-fedora-clang 2.0-10 285.83 NOTE
r-devel-linux-x86_64-fedora-gcc 2.0-10 272.62 OK
r-devel-macosx-x86_64-clang 2.0-10 227.57 NOTE
r-devel-macosx-x86_64-gcc 2.0-10 ERROR
r-devel-windows-ix86+x86_64 2.0-10 20.00 221.00 241.00 OK
r-patched-linux-x86_64 2.0-10 6.06 131.19 137.25 NOTE
r-patched-solaris-sparc 2.0-10 1404.00 OK --no-build-vignettes
r-patched-solaris-x86 2.0-10 316.50 OK
r-release-linux-ix86 2.0-10 14.00 201.00 215.00 NOTE
r-release-linux-x86_64 2.0-10 6.40 132.52 138.92 NOTE
r-release-macosx-x86_64 2.0-10 NOTE
r-release-windows-ix86+x86_64 2.0-10 30.00 222.00 252.00 OK
r-oldrel-windows-ix86+x86_64 2.0-10 24.00 231.00 255.00 OK

Check Details

Version: 2.0-10
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File ‘vegan/R/orditkplot.R’:
     assign(dumpName, xy, envir = .GlobalEnv)
     assign(dumpName, xy, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-macosx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 2.0-10
Check: package dependencies
Result: ERROR
    Package required but not available: ‘permute’
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-devel-macosx-x86_64-gcc

Version: 2.0-10
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: 'smacof'
Flavor: r-release-macosx-x86_64

Version: 2.0-10
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    (/usr/local/texlive/2012basic/texmf-dist/tex/latex/amsfonts/amssymb.sty
    (/usr/local/texlive/2012basic/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
    
    ! LaTeX Error: File `ucs.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    Enter file name:
    /Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/
    vegan.Rcheck/vign_test/vegan/vignettes/vegan.sty:11: Emergency stop.
    <read *>
    
    l.11 \usepackage
     [utf8x]{inputenc}^^M
    /Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/
    vegan.Rcheck/vign_test/vegan/vignettes/vegan.sty:11: ==> Fatal error occurred,
     no output PDF file produced!
    Transcript written on decision-vegan.log.
    /usr/bin/texi2dvi: pdflatex exited with bad status, quitting.
    /usr/bin/texi2dvi: see decision-vegan.log for errors.
    make: *** [decision-vegan.pdf] Error 1
    Error in buildVignettes(dir = "/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/vegan.Rcheck/vign_test/vegan") :
     running 'make' failed
    Execution halted
Flavor: r-release-macosx-x86_64