CRAN Package Check Results for Package vegan

Last updated on 2015-07-07 03:48:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.3-0 7.81 145.74 153.56 NOTE
r-devel-linux-x86_64-debian-gcc 2.3-0 8.34 150.76 159.11 NOTE
r-devel-linux-x86_64-fedora-clang 2.3-0 301.31 NOTE
r-devel-linux-x86_64-fedora-gcc 2.3-0 285.01 NOTE
r-devel-osx-x86_64-clang 2.3-0 225.50 NOTE
r-devel-windows-ix86+x86_64 2.3-0 40.00 272.00 312.00 NOTE
r-patched-linux-x86_64 2.3-0 7.91 144.63 152.54 NOTE
r-patched-solaris-sparc 2.3-0 1581.60 OK --no-build-vignettes
r-patched-solaris-x86 2.3-0 360.80 OK
r-release-linux-x86_64 2.3-0 7.98 149.10 157.08 NOTE
r-release-osx-x86_64-mavericks 2.3-0 OK
r-release-windows-ix86+x86_64 2.3-0 37.00 270.00 307.00 OK
r-oldrel-windows-ix86+x86_64 2.3-0 31.00 359.00 390.00 OK

Check Details

Version: 2.3-0
Check: R code for possible problems
Result: NOTE
    bioenv.default: no visible global function definition for
     ‘flush.console’
    bioenv.default: no visible global function definition for ‘combn’
    metaMDSiter: no visible global function definition for ‘flush.console’
    oecosimu: no visible global function definition for ‘object.size’
    ordiellipse: no visible global function definition for ‘rgb’
    ordiellipse: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘rgb’
    ordihull: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘chull’
    ordisurf.default: no visible global function definition for ‘chull’
    orditkplot: no visible global function definition for ‘check.options’
    orditkplot : sanecol: no visible global function definition for
     ‘palette’
    orditkplot : devDump: no visible global function definition for
     ‘postscript’
    orditkplot : devDump: no visible global function definition for ‘pdf’
    orditkplot : devDump: no visible global function definition for ‘svg’
    orditkplot : devDump: no visible global function definition for ‘png’
    orditkplot : devDump: no visible global function definition for ‘jpeg’
    orditkplot : devDump: no visible global function definition for ‘tiff’
    orditkplot : devDump: no visible global function definition for ‘bmp’
    orditkplot : devDump: no visible global function definition for ‘xfig’
    orditkplot : devDump: no visible global function definition for
     ‘dev.off’
    permutest.betadisper: no visible global function definition for ‘combn’
    persp.renyiaccum: no visible global function definition for
     ‘heat.colors’
    persp.tsallisaccum: no visible global function definition for
     ‘heat.colors’
    plot.betadisper: no visible global function definition for ‘chull’
    plot.cascadeKM: no visible global function definition for ‘rainbow’
    plot.nestedtemp: no visible global function definition for
     ‘heat.colors’
    screeplot.cca: no visible global function definition for ‘xy.coords’
    screeplot.decorana: no visible global function definition for
     ‘xy.coords’
    screeplot.prcomp: no visible global function definition for ‘xy.coords’
    screeplot.princomp: no visible global function definition for
     ‘xy.coords’
    showvarparts: no visible global function definition for ‘rgb’
    showvarparts: no visible global function definition for ‘col2rgb’
    simper: no visible global function definition for ‘combn’
    vegandocs: no visible global function definition for ‘browseURL’
    Undefined global functions or variables:
     bmp browseURL check.options chull col2rgb combn dev.off flush.console
     heat.colors jpeg object.size palette pdf png postscript rainbow rgb
     svg tiff xfig xy.coords
    
    Found the following assignments to the global environment:
    File ‘vegan/R/orditkplot.R’:
     assign(dumpName, xy, envir = .GlobalEnv)
     assign(dumpName, xy, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang

Version: 2.3-0
Check: R code for possible problems
Result: NOTE
    bioenv.default: no visible global function definition for
     ‘flush.console’
    bioenv.default: no visible global function definition for ‘combn’
    metaMDSiter: no visible global function definition for ‘flush.console’
    oecosimu: no visible global function definition for ‘object.size’
    ordiellipse: no visible global function definition for ‘rgb’
    ordiellipse: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘rgb’
    ordihull: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘chull’
    ordisurf.default: no visible global function definition for ‘chull’
    orditkplot: no visible global function definition for ‘check.options’
    orditkplot : sanecol: no visible global function definition for
     ‘palette’
    orditkplot : devDump: no visible global function definition for
     ‘postscript’
    orditkplot : devDump: no visible global function definition for ‘pdf’
    orditkplot : devDump: no visible global function definition for ‘svg’
    orditkplot : devDump: no visible global function definition for ‘png’
    orditkplot : devDump: no visible global function definition for ‘jpeg’
    orditkplot : devDump: no visible global function definition for ‘tiff’
    orditkplot : devDump: no visible global function definition for ‘bmp’
    orditkplot : devDump: no visible global function definition for ‘xfig’
    orditkplot : devDump: no visible global function definition for
     ‘dev.off’
    permutest.betadisper: no visible global function definition for ‘combn’
    persp.renyiaccum: no visible global function definition for
     ‘heat.colors’
    persp.tsallisaccum: no visible global function definition for
     ‘heat.colors’
    plot.betadisper: no visible global function definition for ‘chull’
    plot.cascadeKM: no visible global function definition for ‘rainbow’
    plot.nestedtemp: no visible global function definition for
     ‘heat.colors’
    screeplot.cca: no visible global function definition for ‘xy.coords’
    screeplot.decorana: no visible global function definition for
     ‘xy.coords’
    screeplot.prcomp: no visible global function definition for ‘xy.coords’
    screeplot.princomp: no visible global function definition for
     ‘xy.coords’
    showvarparts: no visible global function definition for ‘rgb’
    showvarparts: no visible global function definition for ‘col2rgb’
    simper: no visible global function definition for ‘combn’
    vegandocs: no visible global function definition for ‘browseURL’
    Undefined global functions or variables:
     bmp browseURL check.options chull col2rgb combn dev.off flush.console
     heat.colors jpeg object.size palette pdf png postscript rainbow rgb
     svg tiff xfig xy.coords
Flavors: r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2.3-0
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File ‘vegan/R/orditkplot.R’:
     assign(dumpName, xy, envir = .GlobalEnv)
     assign(dumpName, xy, envir = .GlobalEnv)
Flavors: r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-x86_64