CRAN Package Check Results for Package vegan

Last updated on 2015-07-30 03:48:42.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.3-0 8.14 146.38 154.52 NOTE
r-devel-linux-x86_64-debian-gcc 2.3-0 8.49 147.79 156.28 NOTE
r-devel-linux-x86_64-fedora-clang 2.3-0 298.77 NOTE
r-devel-linux-x86_64-fedora-gcc 2.3-0 283.67 NOTE
r-devel-osx-x86_64-clang 2.3-0 222.57 NOTE
r-devel-windows-ix86+x86_64 2.3-0 40.00 304.00 344.00 NOTE
r-patched-linux-x86_64 2.3-0 7.96 147.38 155.34 NOTE
r-patched-solaris-sparc 2.3-0 1743.90 OK --no-build-vignettes
r-patched-solaris-x86 2.3-0 357.10 OK
r-release-linux-x86_64 2.3-0 8.00 145.64 153.64 NOTE
r-release-osx-x86_64-mavericks 2.3-0 OK
r-release-windows-ix86+x86_64 2.3-0 45.00 286.00 331.00 OK
r-oldrel-windows-ix86+x86_64 2.3-0 33.00 444.00 477.00 OK

Check Details

Version: 2.3-0
Check: R code for possible problems
Result: NOTE
    bioenv.default: no visible global function definition for
     ‘flush.console’
    bioenv.default: no visible global function definition for ‘combn’
    metaMDSiter: no visible global function definition for ‘flush.console’
    oecosimu: no visible global function definition for ‘object.size’
    ordiellipse: no visible global function definition for ‘rgb’
    ordiellipse: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘rgb’
    ordihull: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘chull’
    ordisurf.default: no visible global function definition for ‘chull’
    orditkplot: no visible global function definition for ‘check.options’
    orditkplot : sanecol: no visible global function definition for
     ‘palette’
    orditkplot : devDump: no visible global function definition for
     ‘postscript’
    orditkplot : devDump: no visible global function definition for ‘pdf’
    orditkplot : devDump: no visible global function definition for ‘svg’
    orditkplot : devDump: no visible global function definition for ‘png’
    orditkplot : devDump: no visible global function definition for ‘jpeg’
    orditkplot : devDump: no visible global function definition for ‘tiff’
    orditkplot : devDump: no visible global function definition for ‘bmp’
    orditkplot : devDump: no visible global function definition for ‘xfig’
    orditkplot : devDump: no visible global function definition for
     ‘dev.off’
    permutest.betadisper: no visible global function definition for ‘combn’
    persp.renyiaccum: no visible global function definition for
     ‘heat.colors’
    persp.tsallisaccum: no visible global function definition for
     ‘heat.colors’
    plot.betadisper: no visible global function definition for ‘chull’
    plot.cascadeKM: no visible global function definition for ‘rainbow’
    plot.nestedtemp: no visible global function definition for
     ‘heat.colors’
    screeplot.cca: no visible global function definition for ‘xy.coords’
    screeplot.decorana: no visible global function definition for
     ‘xy.coords’
    screeplot.prcomp: no visible global function definition for ‘xy.coords’
    screeplot.princomp: no visible global function definition for
     ‘xy.coords’
    showvarparts: no visible global function definition for ‘rgb’
    showvarparts: no visible global function definition for ‘col2rgb’
    simper: no visible global function definition for ‘combn’
    vegandocs: no visible global function definition for ‘browseURL’
    Undefined global functions or variables:
     bmp browseURL check.options chull col2rgb combn dev.off flush.console
     heat.colors jpeg object.size palette pdf png postscript rainbow rgb
     svg tiff xfig xy.coords
    Consider adding
     importFrom("grDevices", "bmp", "check.options", "chull", "col2rgb",
     "dev.off", "heat.colors", "jpeg", "palette", "pdf", "png",
     "postscript", "rainbow", "rgb", "svg", "tiff", "xfig",
     "xy.coords")
     importFrom("utils", "browseURL", "combn", "flush.console",
     "object.size")
    to your NAMESPACE.
    
    Found the following assignments to the global environment:
    File ‘vegan/R/orditkplot.R’:
     assign(dumpName, xy, envir = .GlobalEnv)
     assign(dumpName, xy, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang

Version: 2.3-0
Check: R code for possible problems
Result: NOTE
    bioenv.default: no visible global function definition for
     ‘flush.console’
    bioenv.default: no visible global function definition for ‘combn’
    metaMDSiter: no visible global function definition for ‘flush.console’
    oecosimu: no visible global function definition for ‘object.size’
    ordiellipse: no visible global function definition for ‘rgb’
    ordiellipse: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘rgb’
    ordihull: no visible global function definition for ‘col2rgb’
    ordihull: no visible global function definition for ‘chull’
    ordisurf.default: no visible global function definition for ‘chull’
    orditkplot: no visible global function definition for ‘check.options’
    orditkplot : sanecol: no visible global function definition for
     ‘palette’
    orditkplot : devDump: no visible global function definition for
     ‘postscript’
    orditkplot : devDump: no visible global function definition for ‘pdf’
    orditkplot : devDump: no visible global function definition for ‘svg’
    orditkplot : devDump: no visible global function definition for ‘png’
    orditkplot : devDump: no visible global function definition for ‘jpeg’
    orditkplot : devDump: no visible global function definition for ‘tiff’
    orditkplot : devDump: no visible global function definition for ‘bmp’
    orditkplot : devDump: no visible global function definition for ‘xfig’
    orditkplot : devDump: no visible global function definition for
     ‘dev.off’
    permutest.betadisper: no visible global function definition for ‘combn’
    persp.renyiaccum: no visible global function definition for
     ‘heat.colors’
    persp.tsallisaccum: no visible global function definition for
     ‘heat.colors’
    plot.betadisper: no visible global function definition for ‘chull’
    plot.cascadeKM: no visible global function definition for ‘rainbow’
    plot.nestedtemp: no visible global function definition for
     ‘heat.colors’
    screeplot.cca: no visible global function definition for ‘xy.coords’
    screeplot.decorana: no visible global function definition for
     ‘xy.coords’
    screeplot.prcomp: no visible global function definition for ‘xy.coords’
    screeplot.princomp: no visible global function definition for
     ‘xy.coords’
    showvarparts: no visible global function definition for ‘rgb’
    showvarparts: no visible global function definition for ‘col2rgb’
    simper: no visible global function definition for ‘combn’
    vegandocs: no visible global function definition for ‘browseURL’
    Undefined global functions or variables:
     bmp browseURL check.options chull col2rgb combn dev.off flush.console
     heat.colors jpeg object.size palette pdf png postscript rainbow rgb
     svg tiff xfig xy.coords
    Consider adding
     importFrom("grDevices", "bmp", "check.options", "chull", "col2rgb",
     "dev.off", "heat.colors", "jpeg", "palette", "pdf", "png",
     "postscript", "rainbow", "rgb", "svg", "tiff", "xfig",
     "xy.coords")
     importFrom("utils", "browseURL", "combn", "flush.console",
     "object.size")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2.3-0
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File ‘vegan/R/orditkplot.R’:
     assign(dumpName, xy, envir = .GlobalEnv)
     assign(dumpName, xy, envir = .GlobalEnv)
Flavors: r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-x86_64