CRAN Package Check Results for Package vegan

Last updated on 2014-12-21 11:46:48.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.2-0 9.40 185.54 194.94 WARN
r-devel-linux-x86_64-debian-gcc 2.2-0 9.13 179.83 188.96 WARN
r-devel-linux-x86_64-fedora-clang 2.2-0 377.88 WARN
r-devel-linux-x86_64-fedora-gcc 2.2-0 349.09 WARN
r-devel-osx-x86_64-clang 2.2-0 402.20 WARN
r-devel-windows-ix86+x86_64 2.2-0 32.00 286.00 318.00 OK
r-patched-linux-x86_64 2.2-0 10.15 199.17 209.32 WARN
r-patched-solaris-sparc 2.2-0 2004.50 WARN --no-build-vignettes
r-patched-solaris-x86 2.2-0 546.30 WARN
r-release-linux-ix86 2.2-0 11.98 261.86 273.85 WARN
r-release-linux-x86_64 2.2-0 10.02 191.31 201.33 WARN
r-release-osx-x86_64-mavericks 2.2-0 NOTE
r-release-osx-x86_64-snowleopard 2.2-0 OK
r-release-windows-ix86+x86_64 2.2-0 30.00 299.00 329.00 OK
r-oldrel-windows-ix86+x86_64 2.2-0 29.00 305.00 334.00 OK

Check Details

Version: 2.2-0
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File ‘vegan/R/orditkplot.R’:
     assign(dumpName, xy, envir = .GlobalEnv)
     assign(dumpName, xy, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 2.2-0
Check: Rd cross-references
Result: WARN
    Unknown package ‘mvpart’ in Rd xrefs
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64

Version: 2.2-0
Flags: --no-build-vignettes
Check: Rd cross-references
Result: WARN
    Unknown package ‘mvpart’ in Rd xrefs
Flavor: r-patched-solaris-sparc

Version: 2.2-0
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    (/usr/local/texlive/2013basic/texmf-dist/tex/latex/amsfonts/amssymb.sty
    (/usr/local/texlive/2013basic/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
    
    ! LaTeX Error: File `ucs.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    Enter file name:
    /Builds/CRAN-QA-Simon/packages/mavericks-x86_64/results/3.1/vegan.Rcheck/vign_t
    est/vegan/vignettes/vegan.sty:11: Emergency stop.
    <read *>
    
    l.11 \usepackage
     [utf8x]{inputenc}^^M
    /Builds/CRAN-QA-Simon/packages/mavericks-x86_64/results/3.1/vegan.Rcheck/vign_t
    est/vegan/vignettes/vegan.sty:11: ==> Fatal error occurred, no output PDF file
     produced!
    Transcript written on decision-vegan.log.
    /usr/bin/texi2dvi: pdflatex exited with bad status, quitting.
    /usr/bin/texi2dvi: see decision-vegan.log for errors.
    make: *** [decision-vegan.pdf] Error 1
    Error in buildVignettes(dir = "/Builds/CRAN-QA-Simon/packages/mavericks-x86_64/results/3.1/vegan.Rcheck/vign_test/vegan") :
     running 'make' failed
    Execution halted
Flavor: r-release-osx-x86_64-mavericks