CRAN Package Check Results for Package vegclust

Last updated on 2015-07-02 11:48:50.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.3 3.20 54.23 57.43 NOTE
r-devel-linux-x86_64-debian-gcc 1.6.3 3.19 53.06 56.26 NOTE
r-devel-linux-x86_64-fedora-clang 1.6.3 116.57 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6.3 111.14 NOTE
r-devel-osx-x86_64-clang 1.6.3 90.52 NOTE
r-devel-windows-ix86+x86_64 1.6.3 8.00 81.00 89.00 NOTE
r-patched-linux-x86_64 1.6.3 3.27 54.25 57.52 NOTE
r-patched-solaris-sparc 1.6.3 698.70 NOTE
r-patched-solaris-x86 1.6.3 151.40 NOTE
r-release-linux-x86_64 1.6.3 3.30 55.93 59.23 NOTE
r-release-osx-x86_64-mavericks 1.6.3 NOTE
r-release-windows-ix86+x86_64 1.6.3 10.00 80.00 90.00 NOTE
r-oldrel-windows-ix86+x86_64 1.6.3 14.00 157.00 171.00 NOTE

Check Details

Version: 1.6.3
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘sp’ ‘vegan’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.6.3
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.CAP plot.mvegclust summary.clustconst
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.6.3
Check: R code for possible problems
Result: NOTE
    as.vegclust : dist2clusters: no visible global function definition for
     ‘as.dist’
    clustmedoid: no visible global function definition for ‘dist’
    clustvar : clustvar1: no visible global function definition for ‘var’
    clustvar: no visible global function definition for ‘as.dist’
    hcr: no visible global function definition for ‘as.dist’
    hcr: no visible global function definition for ‘var’
    hier.vegclust: no visible global function definition for ‘cutree’
    interclustdist: no visible global function definition for ‘as.dist’
    plot.CAP: no visible global function definition for ‘plot’
    plot.CAP: no visible global function definition for ‘axis’
    plot.CAP: no visible global function definition for ‘matlines’
    plot.mvegclust: no visible global function definition for ‘plot’
    plot.mvegclust: no visible global function definition for ‘axis’
    plot.mvegclust: no visible global function definition for ‘abline’
    plot.mvegclust: no visible global function definition for ‘lines’
    plot.mvegclust: no visible global function definition for ‘legend’
    vegclust : vegclustone: no visible global function definition for
     ‘dist’
    vegdiststruct: no visible global function definition for ‘dist’
    vegdiststruct: no visible global function definition for ‘decostand’
    vegdiststruct: no visible global function definition for ‘as.dist’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.6.3
Check: R code for possible problems
Result: NOTE
    as.vegclust : dist2clusters: no visible global function definition for
     ‘as.dist’
    clustmedoid: no visible global function definition for ‘dist’
    clustvar : clustvar1: no visible global function definition for ‘var’
    clustvar: no visible global function definition for ‘as.dist’
    hcr: no visible global function definition for ‘as.dist’
    hcr: no visible global function definition for ‘var’
    hier.vegclust: no visible global function definition for ‘cutree’
    interclustdist: no visible global function definition for ‘as.dist’
    plot.CAP: no visible global function definition for ‘plot’
    plot.CAP: no visible global function definition for ‘axis’
    plot.CAP: no visible global function definition for ‘matlines’
    plot.mvegclust: no visible global function definition for ‘plot’
    plot.mvegclust: no visible global function definition for ‘axis’
    plot.mvegclust: no visible global function definition for ‘abline’
    plot.mvegclust: no visible global function definition for ‘lines’
    plot.mvegclust: no visible global function definition for ‘legend’
    vegclust : vegclustone: no visible global function definition for
     ‘dist’
    vegdiststruct: no visible global function definition for ‘dist’
    vegdiststruct: no visible global function definition for ‘decostand’
    vegdiststruct: no visible global function definition for ‘as.dist’
    Undefined global functions or variables:
     abline as.dist axis cutree decostand dist legend lines matlines plot
     var
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.6.3
Check: R code for possible problems
Result: NOTE
    vegdiststruct: no visible global function definition for ‘decostand’
Flavors: r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64