BEDMatrix: Extract Genotypes from a PLINK .bed File

A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<>), the whole genome association analysis toolset, without loading the entire file into memory.

Version: 1.4.0
Depends: R (≥ 3.0.0)
Imports: methods, Rcpp (≥ 0.12.1), crochet
LinkingTo: Rcpp, BH
Suggests: data.table, testthat
Published: 2017-05-07
Author: Alexander Grueneberg [aut, cre], Lian Lian [ctb], Gustavo de los Campos [ctb]
Maintainer: Alexander Grueneberg <alexander.grueneberg at>
License: MIT + file LICENSE
NeedsCompilation: yes
SystemRequirements: C++11
Materials: README NEWS
CRAN checks: BEDMatrix results


Reference manual: BEDMatrix.pdf
Package source: BEDMatrix_1.4.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: BEDMatrix_1.4.0.tgz
OS X Mavericks binaries: r-oldrel: BEDMatrix_1.4.0.tgz
Old sources: BEDMatrix archive

Reverse dependencies:

Reverse depends: BGData
Reverse suggests: popkin, symDMatrix


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