BayHap: Bayesian analysis of haplotype association using Markov Chain Monte Carlo

The package BayHap performs simultaneous estimation of uncertain haplotype frequencies and association with haplotypes based on generalized linear models for quantitative, binary and survival traits. Bayesian statistics and Markov Chain Monte Carlo techniques are the theoretical framework for the methods of estimation included in this package. Prior values for model parameters can be included by the user. Convergence diagnostics and statistical and graphical analysis of the sampling output can be also carried out.

Version: 1.0.1
Depends: boa
Published: 2013-03-13
Author: Raquel Iniesta and Victor Moreno
Maintainer: Raquel Iniesta <riniesta at pssjd.org>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: BayHap results

Downloads:

Reference manual: BayHap.pdf
Package source: BayHap_1.0.1.tar.gz
OS X binary: BayHap_1.0.1.tgz
Windows binary: BayHap_1.0.1.zip
Old sources: BayHap archive