BioMark: Find biomarkers in two-class discrimination problems

The package provides biomarker selection for several classification methods: the lasso/elastic net, PCLDA, PLSDA, and several t-tests. Two approaches are provided, one based on the stability of model coefficients under perturbation, and the other on higher criticism.

Version: 0.4.1
Depends: pls, glmnet, st (≥ 1.1.6)
Suggests: MASS
Published: 2012-11-06
Author: Ron Wehrens, Pietro Franceschi
Maintainer: Ron Wehrens <ron.wehrens at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Citation: BioMark citation info
In views: ChemPhys
CRAN checks: BioMark results


Reference manual: BioMark.pdf
Package source: BioMark_0.4.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Snow Leopard binaries: r-release: BioMark_0.4.1.tgz, r-oldrel: BioMark_0.4.1.tgz
OS X Mavericks binaries: r-release: BioMark_0.4.1.tgz
Old sources: BioMark archive