BioMark: Find Biomarkers in Two-Class Discrimination Problems

Variable selection methods are provided for several classification methods: the lasso/elastic net, PCLDA, PLSDA, and several t-tests. Two approaches for selecting cutoffs can be used, one based on the stability of model coefficients under perturbation, and the other on higher criticism.

Version: 0.4.5
Depends: pls, glmnet, MASS, st (≥ 1.1.6)
Published: 2015-09-07
DOI: 10.32614/CRAN.package.BioMark
Author: Ron Wehrens, Pietro Franceschi
Maintainer: Ron Wehrens <ron.wehrens at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Citation: BioMark citation info
Materials: NEWS
In views: ChemPhys
CRAN checks: BioMark results


Reference manual: BioMark.pdf


Package source: BioMark_0.4.5.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): BioMark_0.4.5.tgz, r-oldrel (arm64): BioMark_0.4.5.tgz, r-release (x86_64): BioMark_0.4.5.tgz, r-oldrel (x86_64): BioMark_0.4.5.tgz
Old sources: BioMark archive

Reverse dependencies:

Reverse suggests: biosigner


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