BoSSA: a Bunch of Structure and Sequence Analysis

Sort sequence from genbank. Retrieve sequence information from genbank (designed for viruses sequences and retrieve information such as isolation date and host). BLAST sequence and accession numbers. Detect group of sequences presenting phylogeography signal. Read PDB file (protein 3D structure file).

Version: 1.2
Imports: ape, SoDA
Published: 2010-01-26
Author: Pierre Lefeuvre
Maintainer: Pierre Lefeuvre <bossa.package at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL]
NeedsCompilation: no
In views: Phylogenetics
CRAN checks: BoSSA results

Downloads:

Reference manual: BoSSA.pdf
Package source: BoSSA_1.2.tar.gz
Windows binaries: r-devel: BoSSA_1.2.zip, r-release: BoSSA_1.2.zip, r-oldrel: BoSSA_1.2.zip
OS X Snow Leopard binaries: r-release: BoSSA_1.2.tgz, r-oldrel: BoSSA_1.2.tgz
OS X Mavericks binaries: r-release: BoSSA_1.2.tgz
Old sources: BoSSA archive