CNprep: Pre-process DNA Copy Number (CN) Data for Detection of CN Events

This package evaluates DNA copy number data, using both their initial form (copy number as a noisy function of genomic position) and their approximation by a piecewise-constant function (segmentation), for the purpose of identifying genomic regions where the copy number differs from the norm.

Version: 2.0
Depends: R (≥ 2.10), parallel, mclust, rlecuyer
Published: 2014-12-31
Author: Alex Krasnitz, Guoli Sun
Maintainer: Guoli Sun <guolisun87 at>
License: GPL-2
NeedsCompilation: no
CRAN checks: CNprep results


Reference manual: CNprep.pdf
Package source: CNprep_2.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Snow Leopard binaries: r-release: CNprep_2.0.tgz, r-oldrel: CNprep_2.0.tgz
OS X Mavericks binaries: r-release: CNprep_2.0.tgz
Old sources: CNprep archive