ChIPtest: Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data

Nonparametric Tests to identify the differential enrichment region for two conditions or time-course ChIP-seq data. It includes: data preprocessing function, estimation of a small constant used in hypothesis testing, a kernel-based two sample nonparametric test, two assumption-free two sample nonparametric test.

Version: 1.0
Published: 2016-07-20
Author: Vicky Qian Wu ; Kyoung-Jae Won ; Hongzhe Li
Maintainer: Vicky Qian Wu <wuqian7 at gmail.com>
License: GPL (≥ 2.15.1)
NeedsCompilation: yes
CRAN checks: ChIPtest results

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Reference manual: ChIPtest.pdf
Package source: ChIPtest_1.0.tar.gz
Windows binaries: r-devel: ChIPtest_1.0.zip, r-release: ChIPtest_1.0.zip, r-oldrel: ChIPtest_1.0.zip
OS X El Capitan binaries: r-release: ChIPtest_1.0.tgz
OS X Mavericks binaries: r-oldrel: ChIPtest_1.0.tgz

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