DCGL: Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data

Functions for 1) gene filtration; 2) link filtration; 3) differential co-expression analysis: DCG (Differential Coexpressed Gene) identification and DCL (Differentially Coexpressed Link) identification; and 4) differential regulation analysis: DRG (Differential Regulated Gene) identification, DRL (Differential Regulated Link) identification, DRL visualization and regulator ranking.

Version: 2.1.2
Depends: R (≥ 2.10)
Imports: igraph, limma
Published: 2014-12-18
Author: Jing Yang, Hui Yu, Bao-Hong Liu, Zhongming Zhao, Lei Liu, Liang-Xiao Ma, Yi-Xue Li, Yuan-Yuan Li
Maintainer: Bao-Hong Liu <bhliu at scbit.org>
License: GPL (> 2)
NeedsCompilation: no
Citation: NA
Materials: NA
CRAN checks: DCGL results

Downloads:

Reference manual: DCGL.pdf
Package source: DCGL_2.1.2.tar.gz
Windows binaries: r-devel: DCGL_2.1.2.zip, r-release: DCGL_2.1.2.zip, r-oldrel: DCGL_2.1.2.zip
OS X Snow Leopard binaries: r-release: DCGL_2.1.2.tgz, r-oldrel: DCGL_2.1.2.tgz
OS X Mavericks binaries: r-release: DCGL_2.1.2.tgz
Old sources: DCGL archive