DCGL: Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data

Functions for 1) gene filtration; 2) link filtration; 3) differential co-expression analysis: DCG (Differential Coexpressed Gene) identification and DCL (Differentially Coexpressed Link) identification; and 4) differential regulation analysis: DRG (Differential Regulated Gene) identification, DRL (Differential Regulated Link) identification, DRL visualization and regulator ranking.

Version: 2.1.1
Depends: R (≥ 2.10)
Imports: igraph, limma
Published: 2013-12-31
Author: Jing Yang, Hui Yu, Bao-Hong Liu, Zhongming Zhao, Lei Liu, Liang-Xiao Ma, Yi-Xue Li, Yuan-Yuan Li
Maintainer: Bao-Hong Liu <bhliu at scbit.org>
License: GPL (> 2)
NeedsCompilation: no
CRAN checks: DCGL results

Downloads:

Reference manual: DCGL.pdf
Package source: DCGL_2.1.1.tar.gz
OS X binary: DCGL_2.1.1.tgz
Windows binary: DCGL_2.1.1.zip
Old sources: DCGL archive