EstMix: Tumor Clones Percentage Estimations

Includes R functions for the estimation of tumor clones percentages for both snp data and (whole) genome sequencing data. See Cheng, Y., Dai, J. Y., Paulson, T. G., Wang, X., Li, X., Reid, B. J., & Kooperberg, C. (2017). Quantification of multiple tumor clones using gene array and sequencing data. The Annals of Applied Statistics, 11(2), 967-991, <doi:10.1214/17-AOAS1026> for more details.

Version: 1.0.1
Imports: Rcpp (≥ 0.12.12), PSCBS
LinkingTo: Rcpp, RcppArmadillo
Published: 2018-09-13
Author: Xuan You, Yichen Cheng
Maintainer: Xuan You <youxuan90 at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: EstMix results

Downloads:

Reference manual: EstMix.pdf
Package source: EstMix_1.0.1.tar.gz
Windows binaries: r-devel: EstMix_1.0.1.zip, r-release: EstMix_1.0.1.zip, r-oldrel: EstMix_1.0.1.zip
OS X binaries: r-release: EstMix_1.0.tgz, r-oldrel: EstMix_1.0.tgz
Old sources: EstMix archive

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