FILEST: Fine-Level Structure Simulator

A population genetic simulator, which is able to generate synthetic datasets for single-nucleotide polymorphisms (SNP) for multiple populations. The genetic distances among populations can be set according to the Fixation Index (Fst) as explained in Balding and Nichols (1995) <doi:10.1007/BF01441146>. This tool is able to simulate outlying individuals and missing SNPs can be specified. For Genome-wide association study (GWAS), disease status can be set in desired level according risk ratio.

Version: 1.0.3
Depends: R (≥ 3.2.4.0)
Imports: KRIS (≥ 1.1.1), rARPACK, grDevices, stats, utils
Suggests: testthat
Published: 2018-06-10
Author: Kridsadakorn Chaichoompu [aut, cre], Kristel Van Steen [aut], Fentaw Abegaz [aut]
Maintainer: Kridsadakorn Chaichoompu <kridsadakorn at biostatgen.org>
BugReports: https://gitlab.com/kris.ccp/filest/issues
License: GPL-2 | GPL-3
URL: https://gitlab.com/kris.ccp/filest
NeedsCompilation: no
Citation: FILEST citation info
Materials: README NEWS
CRAN checks: FILEST results

Downloads:

Reference manual: FILEST.pdf
Package source: FILEST_1.0.3.tar.gz
Windows binaries: r-devel: FILEST_1.0.3.zip, r-release: FILEST_1.0.3.zip, r-oldrel: FILEST_1.0.3.zip
OS X binaries: r-release: FILEST_1.0.3.tgz, r-oldrel: FILEST_1.0.3.tgz

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