This package implements several functions useful for computing similarities between GO terms and gene products based on their GO annotation. Moreover it allows for computing a GO enrichment analysis
| Version: | 1.1.5.3 |
| Depends: | R (≥ 2.6.0), GO.db (≥ 2.2.0), AnnotationDbi, annotate, org.Dm.eg.db, org.Hs.eg.db, org.Mm.eg.db, org.Pf.plasmo.db, org.Rn.eg.db, org.Sc.sgd.db, topGO, cluster (≥ 1.11.7), mclust (≥ 3.1), RBGL, graph, Matrix, corpcor |
| Suggests: | Rgraphviz |
| Date: | 2008-12-01 |
| Author: | Holger Froehlich, contributions by Tim Beissbarth |
| Maintainer: | Holger Froehlich <h.froehlich at dkfz.de> |
| License: | GPL (≥ 2) |
| URL: | http://www.dkfz.de/mga2/gosim |
| CRAN checks: | GOSim results |
Downloads:
| Package source: | GOSim_1.1.5.3.tar.gz |
| MacOS X binary: | not available as excluded from build, see excludes. |
| Windows binary: | GOSim_1.1.5.3.zip |
| Reference manual: | GOSim.pdf |
| Vignettes: |
GOsim |
| Old sources: | GOSim archive |