GUILDS: Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure

A collection of sampling formulas for the unified neutral model of biogeography and biodiversity. Alongside the sampling formulas, it includes methods to perform maximum likelihood optimization of the sampling formulas, methods to generate data given the neutral model, and methods to estimate the expected species abundance distribution. Sampling formulas included in the GUILDS package are the Etienne Sampling Formula (Etienne 2005), the guild sampling formula, where guilds are assumed to differ in dispersal ability (Janzen et al. 2015), and the guilds sampling formula conditioned on guild size (Janzen et al. 2015).

Version: 1.3
Imports: Rcpp (≥ 0.11.0), pracma
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown
Published: 2016-09-26
Author: Thijs Janzen [aut, cre], Bart Haegeman [ctb], Franck Jabot [ctb], Jerome Chave [ctb]
Maintainer: Thijs Janzen <thijsjanzen at gmail.com>
BugReports: https://github.com/thijsjanzen/GUILDS/issues
License: GPL-2
URL: https://github.com/thijsjanzen/GUILDS
NeedsCompilation: yes
Materials: README
CRAN checks: GUILDS results

Downloads:

Reference manual: GUILDS.pdf
Vignettes: Vignette Title
Package source: GUILDS_1.3.tar.gz
Windows binaries: r-devel: GUILDS_1.3.zip, r-release: GUILDS_1.3.zip, r-oldrel: GUILDS_1.3.zip
OS X Mavericks binaries: r-release: GUILDS_1.3.tgz, r-oldrel: GUILDS_1.3.tgz
Old sources: GUILDS archive

Reverse dependencies:

Reverse imports: sads

Linking:

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