GeneCycle: Identification of Periodically Expressed Genes

The GeneCycle package implements the approaches of Wichert et al. (2004), Ahdesmaki et al. (2005) and Ahdesmaki et al. (2007) for detecting periodically expressed genes from gene expression time series data.

Version: 1.1.2
Depends: R (≥ 2.7.0), MASS, longitudinal (≥ 1.1.3), fdrtool (≥ 1.2.5)
Published: 2012-04-16
Author: Miika Ahdesmaki, Konstantinos Fokianos, and Korbinian Strimmer.
Maintainer: Miika Ahdesmaki <miika.ahdesmaki at gmail.com>
License: GPL (≥ 3)
URL: http://www.cs.tut.fi/~ahdesmak/robustperiodic/index.html
NeedsCompilation: no
Citation: NA
Materials: NA
In views: TimeSeries
CRAN checks: GeneCycle results

Downloads:

Reference manual: GeneCycle.pdf
Package source: GeneCycle_1.1.2.tar.gz
Windows binaries: r-devel: GeneCycle_1.1.2.zip, r-release: GeneCycle_1.1.2.zip, r-oldrel: GeneCycle_1.1.2.zip
OS X Snow Leopard binaries: r-release: GeneCycle_1.1.2.tgz, r-oldrel: GeneCycle_1.1.2.tgz
OS X Mavericks binaries: r-release: GeneCycle_1.1.2.tgz
Old sources: GeneCycle archive