GeneNet is a package for analyzing gene expression (time series) data with focus on the inference of gene networks. In particular, GeneNet implements the methods of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).
| Version: | 1.2.2 |
| Depends: | R (≥ 2.7.0), corpcor (≥ 1.4.7), longitudinal (≥ 1.1.3), fdrtool (≥ 1.2.0) |
| Suggests: | graph (≥ 1.4.0), Rgraphviz (≥ 1.4.0) |
| Date: | 2008-08-17 |
| Author: | Rainer Opgen-Rhein, Juliane Schaefer, and Korbinian Strimmer. |
| Maintainer: | Korbinian Strimmer <strimmer at uni-leipzig.de> |
| License: | GPL (≥ 3) |
| URL: | http://www.strimmerlab.org/software/genenet/ |
| CRAN checks: | GeneNet results |
Downloads:
| Package source: | GeneNet_1.2.2.tar.gz |
| MacOS X binary: | GeneNet_1.2.2.tgz |
| Windows binary: | GeneNet_1.2.2.zip |
| Reference manual: | GeneNet.pdf |
| Old sources: | GeneNet archive |