HMP: Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP

This package provides several functions to perform formal hypothesis testing, and power and sample size calculations for human microbiome experiments. Dirichlet-Multinomial distribution is proposed to model species abundance and ranked abundance data.

Version: 1.3.1
Depends: R (≥ 2.13.0), MCMCpack, dirmult
Published: 2013-05-09
Author: Patricio S. La Rosa, Elena Deych, Berkley Shands, William D. Shannon
Maintainer: Berkley Shands <bshands at dom.wustl.edu>
License: GPL-2
NeedsCompilation: no
Materials: NEWS
CRAN checks: HMP results

Downloads:

Reference manual: HMP.pdf
Package source: HMP_1.3.1.tar.gz
OS X binary: HMP_1.3.1.tgz
Windows binary: HMP_1.3.1.zip
Old sources: HMP archive

Reverse dependencies:

Reverse suggests: HMPTrees