HTSCluster: Clustering high throughput sequencing (HTS) data

This package implements two parameterizations of a Poisson mixture model to cluster observations (e.g., genes) in high throughput sequencing data. Parameter estimation is performed using either the EM or CEM algorithm, and the BIC or ICL criteria are used for model selection (i.e., to choose the number of clusters).

Version: 1.0
Depends: R (≥ 2.10.0)
Published: 2011-11-07
Author: Andrea Rau, Gilles Celeux, Marie-Laure Martin-Magniette, Cathy Maugis-Rabusseau
Maintainer: Andrea Rau <andrea.rau at jouy.inra.fr>
License: GPL (≥ 2)
CRAN checks: HTSCluster results

Downloads:

Package source: HTSCluster_1.0.tar.gz
MacOS X binary: HTSCluster_1.0.tgz
Windows binary: HTSCluster_1.0.zip
Reference manual: HTSCluster.pdf